Helicobacter pylori prevalence in healthy Mexican children: comparison between two non-invasive methods

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Biochemistry, Biophysics and Molecular Biology

Introduction

Helicobacter pylori is a spiral-shaped Gram-negative bacterium that colonizes the gastric mucosa in humans. A long-lasting infection with this bacterium can cause chronic gastritis, peptic ulcer, and gastric cancer (Peek & Crabtree, 2006). This bacterium can be acquired in childhood, usually before the first ten years of life, during which it can cause a transitory infection and be cleared spontaneously (Malaty et al., 2002; Duque et al., 2012). If not cleared, H. pylori can cause gastric disorders, like peptic ulceration, abdominal pain without peptic ulceration, gastroesophageal reflux disease, and recurrent abdominal pain; as well as extra-gastric issues, like low growth rate, iron deficiency, and iron deficiency anemia (Campbell & Thomas, 2005; Rajindrajith, Devanarayana & de Silva, 2009). However, an overwhelming majority of infected children are asymptomatic (Jones et al., 2017). Children can acquire this bacterium from person to person, through the oral-oral or fecal-oral route, although it could also be acquired through contaminated food and water, as well as infected animals (Khalifa, Sharaf & Aziz, 2010). The risk factors that influence the prevalence of H. pylori infection include low socioeconomic level, poor hygiene conditions, overcrowding, family history of parental gastric disease, and conditions that favor the person-to-person contact (Hasosah et al., 2015).

The frequency of H. pylori in Mexican children has decreased in recent years, while in 1998 the frequency of infection was found to be 50% (Torres et al., 1998), in 2012 it was 38% (Duque et al., 2012). However, the diagnosis of H. pylori infection in children is difficult to make, given that symptoms such as abdominal pain, nausea, vomiting, and occasionally diarrhea are unspecific (Bosques-Padilla et al., 2018).

Diagnostic tests to detect H. pylori are classified as invasive and non-invasive, depending on whether they require a gastric tissue sample obtained by endoscopy or not, respectively. Invasive tests include culture, PCR from biopsies, histopathology, and rapid urease test; while non-invasive tests include H. pylori antigens detection in the stool (stool antigen test, SAT), detection of antibodies anti-H. pylori in serum, PCR from oral samples, and urea breath test (Guarner et al., 2010). Of these, endoscopy and histological examination of gastric biopsies remain the gold standard for diagnosis (Campbell & Thomas, 2005). Since gastric malignancy is uncommon in children, the use of non-invasive tests to diagnose H. pylori gastric infection is highly preferred. Due to the potential oral transmission of H. pylori among children and adults, detection of the bacterium in oral cavity samples has been proposed as a diagnostic test, even though it is still not clear whether the oral cavity is another niche for the bacteria, or it is only an entry pathway (Al Sayed et al., 2014). The aim this work was to evaluate the concordance between H. pylori DNA detection in saliva and dental plaque samples by PCR, with antigen detection in stool by immunochromatography, among asymptomatic children in the state of Guerrero, Mexico.

Materials and Methods

Population

One hundred and seventy-one children between 6 and 12 years old were invited to participate in the study. The parents were informed about the importance of early detection of H. pylori, those who agreed to participate signed informed written consent and were asked for a stool sample of their child. In addition, a poll was applied in order to obtain information about the children’s living conditions and oral hygiene. Teacher Nanci Aneli Cabañas Villanueva, principal of the elementary school “Esc. Prim. Daniel Delgadillo C.C.T 12DPR1692 J”, allowed us to contact the students enrolled in the study and their parents. The project was approved by the Bioethics Committee of the Research Directorate of the Autonomous University of Guerrero (CB-004/2K20).

Samples

Before obtaining dental plaque, 1–2 mL saliva samples were obtained by the passive drool method. The samples were collected in sterile propylene tubes containing extraction solution (Tris 10 mM pH 8, EDTA 20 mM pH 8, SDS 0.5%). Supragingival dental plaque samples were collected by a trained odontologist using sterile Gracey curettes (Hu-Friedy, Chicago, IL, USA), and placed in microcentrifuge tubes containing 750 μL of extraction solution. All samples were kept in ice while transported and then frozen at −20 °C until DNA extraction. Stool samples were collected by the parents in sterile containers. The samples were kept in ice until frozen.

DNA extraction from dental plaque and saliva samples

Ten microliters of proteinase K (10 mg/mL) were added to the dental plaque and saliva samples previously dissolved in extraction solution. The samples were incubated at 65 °C for 12 h and the total DNA was obtained by the phenol:chloroform:isoamyl alcohol method. Then it was precipitated with ethanol and the pellet was resuspended in 30 μL of deionized water.

H. pylori detection by PCR

H. pylori DNA in dental plaque and saliva samples was detected by standard PCR using primers HP16-219 (5′-GCTAAGAGATCAGCCTATGTCC-3′) and HPGR16SR (5′-CAATCAGCGTCAGTAATGTTC-3′) (Chang et al., 2006), which amplify a 522 bp fragment of the 16S rRNA gene. The reaction mix was performed in a 15 μL final volume, containing 2.5 mM MgCl2, 0.25 mM dNTP’s, 5 pmol of each primer, 1 U of Taq Platinum DNA polymerase (Invitrogen, Carlsbad, CA, USA), 1× buffer, and 150 ng of DNA. Amplification conditions were: 1 cycle at 94 °C for 5 min; 40 cycles at 94 °C for 30 s, 55 °C for 30 s, and 72 °C for 1 min; and 1 cycle at 72 °C for 7 min. PCR products were subjected to 2.5% agarose gel electrophoresis, stained with ethidium bromide, and visualized with ultraviolet light (UV). Reactions without DNA were included as negative controls and reactions with DNA from H. pylori strain 26695 were included as positive controls. DNA integrity was verified adding primers Sense (5′-CATTTGTCAGGTTCTTGATC-3′) and Antisense (5′-GAAGTTTAGTCTTCCCACTT-3′), which are specific for the promoter region of the human IL-1B gene and amplified a 305 bp fragment (Roman-Roman et al., 2017) (Fig. 1). Only IL-1B-positive samples were included in the study.

Representative results of H. pylori detection in oral samples.

Figure 1: Representative results of H. pylori detection in oral samples.

H. pylori DNA (Hp 16S) detection in (A) dental plaque and (B) saliva samples of asymptomatic children 6 to 12 years old. Lanes: MW-molecular weight marker; −C, negative control; +C, positive control; DP-127 and DP-128, H. pylori positive samples; DP-129, H. pylori negative sample; S-019, H. pylori positive sample; S-001, S-072, and S-055, H. pylori negative samples. IL-1β product was amplified as a DNA integrity control. DP, dental plaque; S, saliva.

H. pylori antigens detection in feces

Detection of H. pylori antigens in stools samples was performed using the immunochromatographic one-step test CERTEST H. pylori (CerTest; Biotec, S.L., Zaragoza, España) following manufacturer’s instructions. This test is a colored chromatographic immunoassay for the qualitative detection of H. pylori in stool samples. The strip consists of a nitrocellulose membrane pre-coated with mouse monoclonal antibodies against H. pylori on the test line, and with rabbit polyclonal antibodies against a specific protein, on the control line. The sample absorbent pad is sprayed with a solution of mouse monoclonal antibodies anti-H. pylori conjugated to red polystyrene latex, and a control solution of a specific binding protein conjugated to green polystyrene latex, forming colored conjugate complexes. A green line appearing in the control line in the results window is an internal control, which confirms sufficient specimen volume and correct procedural technique. The presence of this green line serves as (1) verification that sufficient volume is added, (2) that proper flow is obtained and (3) an internal control for the reagents.

The results were considered negative when only the green line appeared in the results window; positive when in addition to the green control line, a red line also appeared in the site marked with the letter T (test line); and invalid when the green line was completely absent, regardless of the appearance or not of the red line (Fig. 2).

Representative results of H. pylori detection in feces.

Figure 2: Representative results of H. pylori detection in feces.

Negative (UAO-011 y UAO-010) and positive (UAO-008 y UAO-003) samples are shown. The green band is the control, and the red line indicates H. pylori presence.

Statistical analysis

Statistical analysis of the data was performed using STATA v14.0 (StataCorp, College Station, TX, USA) software. Population characteristics, H. pylori frequency, and the relationship between H. pylori and gastric symptoms were compared using Fisher’s exact test or the X2 test when appropriate. Correlation between H. pylori detection methods was calculated using the Kappa index. Statistical significance was considered when p < 0.05.

Results

A total of 171 children, 45% (77/171) boys and 55% (94/171) girls, participated in the study, with an average age of 8.9 and 8.5 years old, respectively (age range between 6 and 12 years) (Table 1). Most of the children (91.8%, 157/171) were living in a rural community.

Table 1:
Sociodemographic characteristics and H. pylori frequency in Mexican children aged 6 to 12 without gastric disease.
Characteristics H. pylori negative n = 69 H. pylori positive n = 102 p value
Sex, n (%) 0.002
Masculine 41 (59.4) 36 (35.3)
Feminine 28 (40.6) 66 (64.7)
Age, n (%) 0.138
6–7 years 12 (17.4) 34 (33.3)
8–9 years 34 (49.3) 38 (37.3)
10–11 years 17 (24.6) 22 (21.6)
12 years 6 (8.7) 8 (7.8)
Overcrowding, n (%) 0.076
No (≤2 people/room) 27 (39.1) 54 (52.9)
Si (>2 people/room) 42 (60.9) 48 (47.1)
DOI: 10.7717/peerj.11546/table-1

Note:

X2 test.

p values in bold are statistically significant.

A child was considered to be H. pylori-positive when any of the samples gave positive results to bacterial DNA or antigens detection (either in one, two, or three samples). It is worth mentioning that some dental plaque and saliva samples were excluded because the sample or the purified DNA were insufficient, and not all the participants provided a stool sample. The overall prevalence of H. pylori was 59.6% (102/171) (Table 2). Our results showed that the frequency of H. pylori was higher in girls, 38.6% (66/171) than in boys, 21% (36/171), and that there was no difference in prevalence among age groups (Table 1). Of the 102 H. pylori-positive cases, 64.7% (66) were girls. Overcrowding was not a risk factor for H. pylori infection in this population. An overcrowding condition was considered when three or more people slept in the same room.

Table 2:
H. pylori frequency in asymptomatic children by sample type.
H. pylori presence Boys Girls Total p value
Saliva, n (%) 0.002&
Negative 42 (95.4) 49 (73.1) 91 (82)
Positive 2 (5.6) 18 (26.9) 20 (18)
Total 44 (100) 67 (100) 111 (100)
Dental plaque, n (%) 0.038
Negative 41 (82) 46 (64.8) 87 (71.9)
Positive 9 (18) 25 (35.2) 34 (28.1)
Total 50 (100) 71 (100) 121 (100)
Stool, n (%) 0.786
Negative 29 (48.3) 41 (46.1) 70 (49.6)
Positive 31 (51.7) 40 (53.9) 71 (50.4)
Total 60 (100) 81 (100) 141 (100)
H. pylori status, n (%) 0.002
Negative 41 (53.3) 28 (29.8) 69 (40.4)
Positive 36 (46.8) 66 (70.2) 102 (59.6)
Total 77 (100) 94 (100) 171 (100)
DOI: 10.7717/peerj.11546/table-2

Notes:

Fisher’s exact test.
X2 test.

p values in bold are statistically significant.

H. pylori frequency by sample type

In order to determine the frequency of H. pylori, 111 samples of saliva, 121 of dental plaque, and 141 of feces were analyzed. The highest H. pylori frequency was found in stool samples (50.4%) (Table 2). The prevalence of H. pylori in saliva and dental plaque was significantly higher in girls (26.9%, p = 0.002; 35.2%, p = 0.038, respectively) than in boys. In feces, no significant difference was found in H. pylori prevalence between both genders (p = 0.786). A variable percentage of children were H. pylori-positive in one, two, or three samples (Fig. 3). A total of 65.7% (67/102) of cases were positive in one sample, 22.5% (23/102) in two, and 3.9% (4/102) in all three samples.

Distribution of positive results.

Figure 3: Distribution of positive results.

Venn diagram showing the number of H. pylori positive children according to sample type.

Concordance between detection methods

The prevalence of H. pylori infection detected by conventional PCR in dental plaque samples was lower than that obtained by SAT, and no agreement was found between the results (κ = −0.1525). A poor agreement was found when the results obtained by conventional PCR of saliva samples and SAT were compared (κ = 0.09) (Table 3).

Table 3:
Concordance among H. pylori DNA detection in saliva and dental plaque samples and SAT from children between 6 and 12 years old without gastric disease.
Dental plaque (H. pylori DNA) n (%) Antigens in feces n (%) p value
Negative Positive
Negative 27 (58.7) 41 (74.5) 0.091
Positive 19 (41.3) 14 (25.5)
Total 46 (100) 55 (100)
Kappa index = −0.1525 0.9546
Saliva (H. pylori DNA) n (%)
Negative 42 (85.7) 42 (76.4) 0.227
Positive 7 (14.3) 13 (23.6)
Total 49 (100) 55 (100)
Kappa index = 0.09 0.1136
DOI: 10.7717/peerj.11546/table-3

Note:

X2 test.

H. pylori and symptoms

All the children that participated in this study were considered healthy, since they reported no disease. Nevertheless, we asked them if they had any gastric symptom (Table 4). The percentage of H. pylori-positive children with frequent belching (16.7%) was significantly higher (p = 0.035) than that of the H. pylori-negative (5.8%). A total of 29.4% of the H. pylori-positive children referred suffering stomachache, however, there was no statistically significant difference with the H. pylori-negative children (p = 0.952). Between 2.9% and 16.7% of the H. pylori-positive children showed some symptom related to gastric infection by this bacterium, however, the percentages were not significantly different from those found in H. pylori-negative children. None of these symptoms were related to H. pylori infection.

Table 4:
Relationship between H. pylori and gastritis symptoms.
Symptom H. pylori negative H. pylori positive p value
Vomit, n (%) 1.000&
No 65 (94.2) 97 (95.1)
Yes 4 (5.8) 5 (4.9)
Nausea, n (%) 0.160&
No 63 (91.3) 99 (97.1)
Yes 6 (8.7) 3 (2.9)
Frequent belching, n (%) 0.035&
No 65 (94.2) 85 (83.3)
Yes 4 (5.8) 17 (16.7)
Stomachache, n (%) 0.952
No 49 (71) 72 (70.6)
Yes 20 (29) 30 (29.4)
Heartburn, n (%) 0.742&
No 66 (95.7) 95 (93.1)
Yes 3 (4.3) 7 (6.9)
Diarrhea, n (%) 0.205&
No 63 (91.3) 98 (96.1)
Yes 6 (8.7) 4 (3.9)
DOI: 10.7717/peerj.11546/table-4

Notes:

Fisher’s exact test.
X2 test.

p values in bold are statistically significant.

Discussion

H. pylori infection occurs at early ages in developing countries and can cause several pathological conditions like gastritis, peptic ulcer disease, iron deficiency anemia, and growth faltering (Rajindrajith, Devanarayana & de Silva, 2009). Therefore, assessing children in regions with high prevalence of H. pylori infection is important to prevent related complications (Ortiz-Princz et al., 2016). Reference methods for H. pylori diagnosis are culture and histology, both invasive methods (Talebi Bezmin Abadi, 2018). However, in healthy or asymptomatic children, endoscopy is not justified, and so non-invasive tests are recommended. In this work we used three methods to determine H. pylori prevalence in apparently healthy Mexican children from the state of Guerrero. We found an overall frequency of 59.6%. This frequency is higher than those found in children from Mexico City and Monterrey (35–38%) in apparently healthy children (Duque et al., 2012; Mendoza et al., 2014; Valdez-Gonzalez et al., 2014; Mendoza-Cantu et al., 2017). This difference could be because the children that participated in this study are from a rural area, where the socioeconomic conditions are more precarious, besides the differences due to the geographical area and the methods used.

Contrary to previous reports that state that crowding is significantly associated with H. pylori infection, and that the frequency of infection increases with age (Torres et al., 1998; Galal et al., 2019), we found that H. pylori prevalence was very similar in all the age groups analyzed, and that crowding was not related to H. pylori frequency. On the other hand, gender was identified as a relevant characteristic for H. pylori acquisition, since most of the girls were H. pylori positive (p = 0.002). The reason for these findings is not known, and our results disagree with recent reports that have found no difference between genders, or male sex association with a higher H. pylori prevalence (Duque et al., 2012; Valdez-Gonzalez et al., 2014; Ibrahim et al., 2017; Mendoza-Cantu et al., 2017). The higher prevalence of H. pylori in girls (38.6%) than in boys (21%) is only in agreement with a previous report in Mexican population (Torres et al., 1998). This result was obtained by PCR of dental plaque (35.2%), followed by PCR of saliva samples (26.9%), while no difference between genders was found by SAT. It is proposed that the presence of H. pylori in the oral cavity is transitory and that it can be acquired by the oral-oral route. These results can be due to the fact that girls tend to be more affectionate and more likely to share food, candies, drinks, etc., and this contributes to a higher H. pylori presence in the oral cavity of girls than in boys.

In this work, H. pylori prevalence in dental plaque was 28.1%, which is lower than that found by Valdez-Gonzalez et al. (2014) and Mendoza-Cantu et al. (2017) (35% and 38%, respectively). In both studies, H. pylori detection was done by qPCR, while we used conventional PCR. The discrepancies can be attributed to differences in the sensitivity of the method used, in the origin of the population and in the age group studied. However, our results are relevant in the context of children’s oral health. In Mexican children, the prevalence of gingivitis associated or not with dental plaque varies from 14% to 91.3% and varies between the children’s geographical regions of origin and age (Taboada Aranza & Talavera Peña, 2011; Rocha Navarro et al., 2014). Although there are great controversies about the relationship between H. pylori infection with gingivitis and periodontal disease, there are data that strengthen the hypothesis that the bacterium is associated with these pathologies (Anand, Kamath & Anil, 2014). In a study conducted by Flores-Trevino et al. (2019) in Mexican adults with periodontitis, 60.5% were H. pylori-positive. Together, these data suggest that 28.1% of asymptomatic children with H. pylori in their dental plaque, are at risk of gastric infection and/or of developing oral pathology associated with the bacteria.

The stool antigen test detects H. pylori antigens in the infected subject, which disappear once the bacteria are eradicated, so it is considered that this test provides evidence of an active infection (Ricci, Holton & Vaira, 2007). Our results suggest that there is some factor that favors H. pylori permanence on the oral cavity of girls or that the bacterium is more frequently acquired by them, but once it gets to the stomach it can effectively colonize the mucous of both sexes. Nevertheless, previous reports using qPCR (Mendoza-Cantu et al., 2017) or culture-qPCR (Valdez-Gonzalez et al., 2014; Mendoza-Cantu et al., 2017) to detect H. pylori DNA in dental plaque samples, found no difference in the prevalence of infection between girls and boys. More work is needed in order to verify the reasons for these differences, keeping in mind that the differences in frequency of infection could be due to the sample site, the sampling method, the H. pylori detection method, and the differences in the number of subjects included in the studies. Also, socioeconomic conditions, children’s age, as well as the geographical region from which they come, are factors that can influence too.

Regarding the methods used, PCR of saliva and dental plaque have a sensitivity and specificity of 95% (Bermúdez Díaz, Ernesto Torres Domínguez & Rodríguez González, 2009), while the values for detection of antigens in feces are >94% and >99%, respectively (Certest H. pylory Certest Biotec, S.L., 2019). Despite having similar sensitivity values, a concordance analysis showed that there is poor to no agreement between the results from PCR and SAT. According to our results the antigen detection in feces is a better method for detection of H. pylori infected children (more sensitive), besides being faster and less expensive than molecular methods. In addition, the presence of H. pylori antigens in feces indicates an active gastrointestinal infection, while the presence of its DNA in oral cavity can be due to transient or dead bacteria. On the other hand, in children it is more feasible to obtain a stool sample than dental plaque and saliva samples with the required quality. However, a major disadvantage of SAT is that this method does not provide information about vacA genotype or cagA status of the bacterium, making it necessary to perform other methods.

H. pylori infection is mainly acquired during the first years of life, and the infected children show no symptoms (Talebi Bezmin Abadi, 2018). Even though the children that participated in this work were apparently healthy, we found that some of them had symptoms of gastritis, however none of these were related to H. pylori.

Conclusions

In conclusion, we found a high H. pylori prevalence among asymptomatic children from 6 to 12 years of age from Guerrero, Mexico, and the SAT method was more sensible to detect H. pylori infection than DNA detection from the bacterium in saliva or dental plaque.

Supplemental Information

H. pylori antigens in feces and PCR in oral samples_dataset.

Raw data obtained from the PCR and stool antigen tests, as well as from the poll.

DOI: 10.7717/peerj.11546/supp-1
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