3.3. Intellectual Structure
In CiteSpace, document co-citation analysis is usually used to construct a co-citation network and visualized to reveal the underlying intellectual structure of a given scientific field [
30]. Members of the same cluster are usually a group of references co-cited by newly published papers; thus, these members are generally closely related and serve as the knowledge base for the new publication. Clusters in the network of co-cited documents can show the intellectual structure of a certain domain [
13].
The top 2% of most cited references from each year were selected to generate a co-citation network and used to explore the relationships among the references of phytomining-related publications. Based on this co-citation network, cluster analysis was carried out, and a timeline view was generated to reveal the intellectual structure of phytomining research area. In
Figure 4, each node represents a cited paper, and the node size is proportional to the number of times it has been cited. Each link between two nodes indicates that they were both cited in a third paper; the thickness of the link is proportional to the number of times they were co-cited. The color of the link represents their first co-cited year and corresponds to the color on the timeline [
22]. A node with strong burstiness is marked with a red center, indicating a sharp increase in its citation frequency over one year or multiple years [
30].
The document co-citation network consists of 121 nodes and 398 edges. Based on the log-likelihood ratio (LLR) cluster algorithm of CiteSpace and according to the title of the citing document, the document co-citation network was divided into seven clusters and labeled with the format “# + number + Label” (
Figure 4). Detailed information on these co-citation clusters is shown in
Table 4.
Furthermore, the evolution of each cluster is shown in
Figure 5 in a timeline format. During cluster analysis of the co-cited network, parameters such as the mean “modularity,” mean “silhouette,” and size of the cluster are used to measure the cluster quality and reveal the “overall structural properties” and scale of the clusters. “Modularity” and “silhouette” range from 0 to 1. Larger modularity values indicate closer clusters of nodes, and a “modularity” >0.3 denotes that the community structure of the network is significant. Larger silhouette values indicate higher homogenization of nodes in the cluster, and “silhouette” >0.7 generally suggests that the cluster has high credibility [
13,
31].
In this research, the mean modularity and silhouette score of these seven clusters are 0.7439 and 0.9272, respectively. This indicates that the literature with related research content is accurately classified into corresponding clusters [
32,
33], and the clustering results can describe the intellectual structure in the field of phytomining well. The top three most actively cited and citing papers in each cluster were identified separately and listed in
Table 5, used to obtain the intellectual structure of this research area.
Figure 4 and
Table 4 show that there are noteworthy differences in the sizes of the clusters; the largest cluster (#0) has 23 members, approximately 19% of the total nodes in the co-citation network. Conversely, the smallest cluster (cluster #6) contains eight nodes, only approximately 6.6% of the total nodes in the co-citation network.
The largest cluster (#0), labeled “nickel accumulation,” contains 23 member references. The average year of publication is 2011. The homogeneity of the cluster, measured by the silhouette score, is 0.927, which is very close to the highest value of 1.00, suggesting a reliable quality. The three most actively cited publications in the cluster (#0) are focused on metal hyperaccumulators. Hyperaccumulators are an essential concept in metal phytoremediation research. The standardization of relevant terms is the basis for clear communication in academia. Van der Ent et al. reviewed and sorted out the common uses of the term “hyperaccumulator” and (re)defined some terms that use different descriptions for the same content [
35]. This research may lay a solid foundation for further research and academic exchanges related to phytomining. Barbaroux et al. studied the feasibility of phytomining with
A. murale. The content of nickel in the incineration crystallization product of a nickel hyperaccumulator was as high as 13.2% and produced a high-grade bio-ore [
34]. The results of five-year field experiments on nickel harvesting from the soil in ultramafic areas with
A. murale show that reasonable agricultural strategies (fertilizer and herbicides) can effectively promote the nickel-to-plant yield ratio by increasing the biomass yield or nickel content in the plant; the nickel yield can reach 105 kg/ha [
36]. The three articles with the most citations were closely related to phytomining. Leitenmaier and Küpper reviewed the metal compartmentation and complexation mechanisms in hyperaccumulator plants [
37]. Maturity and economic benefits are the key factors limiting the commercial application of phytomining technology. Based on introducing the application of phytomining/agromining for nickel bio-ore harvesting, Van den et al. point out that phytomining/agromining has potential application prospects in the field of pollution restoration at mine sites and the sustainable exploitation of metals and minerals [
7]. Phytomining is a technology derived from metal phytoremediation. According to the mechanism of metal transport used, phytoremediation is divided into phytoexclusion, phytostabilization, and phytoextraction. The main difference among them is the bioavailability of the metals in soil. Therefore, Tang et al. believe that through the establishment of different cropping systems (especially of different soil types, plant species/cultivars, agronomic practices, etc.), the transfer of metals through the food chain can be effectively controlled (plant exclusion, plant stability) and the phytomining of metals with non-edible crops can be realized (phytoextraction) [
38].
Labeled “heavy metal uptake”, the second-largest cluster (#1) contains 18 member references, with a mean year of 1996 and a silhouette value of 0.996. All three of the most actively cited publications in cluster #1 are focused on nickel phytomining. In 1997, Robinson published two papers in the
Journal of Geochemical Exploration on the phytoremediation of Ni-contaminated soils with Ni hyperaccumulators (
B. coddii and
A. bertolonii) through potted experiments and in situ experiments exploring the feasibility of nickel phytomining [
4,
5]. In the WoS database, these two publications first proposed the concept of phytomining. These studies are the pioneering works in phytomining research, with a total global citation score of 279. Then, in 1998, Brooks published a systematic introduction to phytomining technology in
Trends in Plant Science [
39]. This paper achieved a global citation score of 221. The three authors with the most citations focused on phytomining with hyperaccumulators. Anderson summarized the process of phytomining for nickel, thallium, and gold with hyperaccumulators. By growing nickel-hyperaccumulating plant species (Streptanthus polygaloides, A. bertolonii and B. coddii), 100, 120.6, and 374 kg/ha sulfur-free Ni was harvested, respectively. In addition, 57 g/t (dry weight) gold was accumulated in Indian mustard (Brassica juncea). The thallium content in whole Iberis intermedia and Biscutella laevigata (Brassicaceae) plants reached 4 and 15 kg/t (dry weight), respectively. These results reveal the potential application of phytomining to future low-grade metal ore mining [
2]. Reeves reviewed the contributions of Professor Robert Brooks and his coworkers’ studies on Ni hyperaccumulators from tropical soils of ultramafic origin and summarized the planting conditions of the discovered tropical heavy metal hyperaccumulators and their potential for phytoremediation and phytomining [
41]. Li’s greenhouse and field experiments found that soil and crop management (such as soil pH, water, and fertilizer management) had a great impact on the efficiency of Ni phytoextraction in two Alyssum species (A. murale and A. corsicum) and suggested that soil and crop management may be effective measures for improving the commercial efficiency of phytomining [
40].
The third cluster (#2), labeled “mining site,” has a mean year of 2004, a silhouette value of 0.907, and a total of 17 member references. All three of the most actively cited publications in cluster #2 are focused on the accumulation mechanisms of hyperaccumulators. The micro-distribution of heavy metals in plants can reflect their accumulation mechanism. In B. coddii, nickel mainly concentrates in the shoots, especially in the leaves, and is mainly distributed in the cuticle of the upper epidermis of the leaves; this is significantly different from the accumulation patterns of other nickel-hyperaccumulator species, which may indicate differences in the mechanism of nickel uptake among different plant species [
44]. Robinson pointed out the shortcomings of phytoremediation in heavy metal-contaminated soil (such as low metal extraction rates, site heterogeneity in different areas, limited plant rooting depths, and the presence of contaminant mixtures) and proposed that the comprehensive application of phytomanagement techniques can make up for these shortcomings (e.g., the combined use of phytoextraction, phytostabilization and the production of valuable biomass). However, there are still some knowledge gaps in phytomanagement research, such as the processes that affect plant–metal interactions and the biophysical processes that affect the flux of metals in the root area, especially in the microenvironment of the inter-root system. Filling these knowledge gaps through extensive basic research on these topics is the basis for the commercial application of phytoremediation and phytomining [
43]. High-resolution scanning electron microscopy (SEM) results showed that nickel was highly enriched in epidermal cell vacuoles of nickel hyperaccumulators (different species/ecotypes of A. murale—Kotodesh and AJ9); the main nickel compartments were the trichome pedicles and the epidermal tissue, while a small amount of nickel was found in palisade and spongy mesophyll and guard/substomatal cells [
42]. The three articles with the most citations drew particular attention to technology for phytoremediation enhancement. The ideal plant for plant extraction should have strong environmental adaptability, fast growth, high biomass, easy harvesting, and the ability to tolerate and accumulate a variety of metals in its harvestable parts. Currently, no plant can meet all the above requirements. With the help of gene transformation, agronomic management, and other measures, crops may be able to obtain most of the above characteristics. However, these practices must be based on in-depth, detailed, systematic research on the mechanisms behind the phytoextraction of heavy metals in plants. According to Sheoran et al. (2011), the main approaches for the hyperaccumulation of heavy metals in hyperaccumulator plants are continuous or natural hyperaccumulation and chemically enhanced or induced hyperaccumulation. Therefore, both gene cloning technology that leads to crops with rapid growth and large biomass and agronomic management measures (physical, chemical, and microbial enhancement approaches) to improve the performance of metal hyperaccumulators are expected to obtain satisfactory phytoremediation effects. Arbuscular mycorrhizal fungi (AMF) are ubiquitous soil organisms that can form symbiotic relationships with the roots of more than 80% of terrestrial plants. They can promote plant growth and metal uptake by improving metal tolerance, increasing nutrient uptake, and improving plant resistance to pathogens and drought. For example, AMF can effectively promote the growth and survival of Ni-hyperaccumulating plants (e.g.,
B. coddii) and increase their biomass yield. In one study, the total nickel content was up to 20 times higher in mycorrhizal plants than in nonmycorrhizal plants [
47]. Rascio and Navari-Izzo outlined the ability of metal-accumulating species to perform remediation on metal-contaminated soil, the feasibility of harvesting metals by growing metal-accumulating species in metal-rich soils (such as metal-contaminated soil, metal tailings, and low-grade metal ore areas), and the prospect of producing functional foods fortified with essential trace elements (e.g., selenium) with metal-accumulating species [
45].
The fourth cluster (#3), labeled “heavy metal,” had a mean year of 2007, a silhouette value of 0.775, and a total of 16 member references. The commercial application of technology is limited by its maturity but is also controlled by its economic benefits. Researchers have carried out extensive research on increasing the cost advantages of phytoremediation. The top three most actively cited publications in cluster #3 are all related to phytomining and its economic benefits. Harris reported that the indicative profitability was approximately 11,500 AU
$/ha/harvest for phytomining nickel with
B. coddii and 26,000 AU
$/ha/harvest for gold phytomining with
B. juncea. However, the indicative profitability was significantly affected by the price and the extractable content of metal [
49]. A decision support system (DSS) for the commercial operation of enterprises has been developed to prejudge the economic benefits of phytomining and can prevent investment risks to companies to some extent [
50]. Chaney et al. reviewed the commercial application process of nickel phytomining with
A. murale in detail and noted that an unreasonable enhanced remediation technology might reduce the cost advantage of phytoremediation (e.g., chelating agents that cause unacceptable contaminant leaching and are cost-prohibitive). They also pointed out that the economic benefits of phytoremediation can be increased through biomass energy utilization and bio-ore recovery [
48]. The articles with the most citations drew particular attention to the economic benefits of phytoremediation from the perspective of metal recovery.
Koptsik reviewed the application of phytoextraction and phytostabilization technology in the remediation of heavy metal contaminated soil [
51]. Sheoran et al. reviewed the potential applications of high-biomass crops (such as forage plants) in phytomining. These crops usually harvest metals through their huge biomass capacity, while hyperaccumulator plants through their excessive accumulation capacity on heavy metals. This concept has greatly expanded the research field of phytoremediation and phytomining. Compared with phytomining with metal hyperaccumulators, phytomining with crops may be more economical, as it harvests not only metals but also biomass energy [
11].
Cluster #4, called “hyperaccumulation yield,” has 15 member references, a silhouette value of 0.836, and a mean year of 2001. The actively cited publications in this cluster are mainly about metal hyperaccumulators. In nickel hyperaccumulators (
A. bertolonii (Desv),
A. lesbiacum (Candargy), and
Thlaspi goesingense (Halacsy)), nickel was mainly distributed in the epidermal cells of the stems and leaves, followed by the boundary cells between the cortical parenchyma and the vascular cylinder. Cellular compartmentation can effectively reduce nickel toxicity to these hyperaccumulators [
52]. Articles with the most citations in cluster #4 are about the enhancement of heavy metal phytoremediation. Existing studies have confirmed that the use of biotechnology (such as protein engineering or genetic engineering) to obtain genetically modified plants with strong tolerance, high hyperaccumulation, and large biomass could be a promising direction for phytoremediation [
53]. Therefore, scarce genetic information (seeding and genetic resources) on metal hyperaccumulators needs to be preserved and increased [
54].
Cluster #5 is about the “growth effect” and has a mean year of 2015, a silhouette value of 0.978, and 15 member references. The three most actively cited publications in cluster #5 mainly focus on the application of phytomining. Nkrumah et al. emphasized the positive role of phytomanagement in nickel phytomining [
55]. Van der Ent et al. (2013) point out that nickel phytomining can not only harvest nickel and biomass energy but also positively affect biodiversity and vegetation restoration. In “Agromining: Farming for metals in the future?”, Antony Van Der Ent et al. describe the original research into phytomining and suggest farming nickel instead of food crops in ultramafic soils, which not only provides better economic benefits but can also restore the farmland. This technology is defined as agromining, a variant of phytomining [
7]. The three articles with the most citations were closely related to research on metal hyperaccumulators. Cluster #5 drew particular attention to the commercial application of nickel phytomining with hyperaccumulators. With the help of portable X-ray fluorescence spectroscopy instruments, Nkrumah et al. found four new nickel hyperaccumulators in the genus
Antidesma [
56]. At present, more than 450 species of nickel hyperaccumulators have been identified. These studies have laid a solid foundation for nickel phytomining. Currently, nickel phytomining has been commercialized in Albania, Austria, Greece, and Spain. First, the nickel in ultramafic soils is harvested with nickel hyperaccumulators, and then high-grade nickel bio-ore is obtained by pyrometallurgical analysis. The appropriate fertilization regimes, crop selection, cropping patterns, bioaugmentation with plant-associated microorganisms, and biomass energy recovery can significantly improve the economic benefits of this process [
28]. Similarly, a nickel “metal farm” was built in the ultramafic soil area of Sabah, Malaysia, and has generated economic benefits. Sustainable agronomic management and the recovery of biomass and valuable products are the keys to profitability [
24].
Labeled “alternative method,” cluster #6 has eight member references, a silhouette value of 0.853, and a mean year of 2007. The most actively cited publications focus on the process of phytomining in detail and its extended application. Systematic research on precious metal phytomining has laid a solid foundation for the development of this technology. Based on strategic considerations, Bozhkov and Tzvetkova studied the feasibility of harvesting rare-earth elements (rhenium) with phytomining. In addition, rhenium levels in alfalfa and clover were as high as 35.090 and 46.586 mg/kg (dry weight), respectively. Eventually, 95% of rhenium-containing leachate can be harvested. This may become a new clean production process for rare-earth elements [
58]. Incineration is very important in bio-ore phytomining. At 1200 °C in a horizontal tubular furnace, bio-ore with 82% nickel can be obtained from
A. bertolonii with a biomass Ni concentration of 1.9%–7.7% (dry weight). Bio-ore with 8.6% nickel can be obtained from
B. coddii with a biomass Ni concentration of 0.49% (dry weight). Sufficient oxidation is beneficial for improving the grade of nickel bio-ore, while the bioaccumulation of calcium in
B. coddii reduces its grade [
57]. The articles with the most citations mainly focused on the phytomining of other metals. For example, aquatic plants such as
Houttuynia cordata Thunb. and
Pteris vittata L. were used to harvest arsenic in a lead-zinc mine area, and their arsenic concentrations reached 1140 and 3750 mg/kg (dry weight), respectively. In addition,
Ageratum houstonianum Mill.,
Potamogeton oxyphyllus Miq., and
P. vittata accumulated 1130, 4210, and 1020 mg/kg (dry weight), respectively, of lead [
59]. Furthermore, a variety of precious metals (indium, silver, lead, copper, cadmium, and zinc) can be simultaneously harvested by
Eleocharis acicularis, and the accumulated concentration can reach 477 mg/kg (dry weight) of indium in the roots and 326, 1120, 575, 195, and 213 mg/kg (dry weight) of Ag, Pb, Cu, Cd, and Zn, respectively, in the shoots [
60].
3.4. Research Trends
In the CiteSpace co-occurrence analysis, bursty keywords usually reflect topics that have attracted the attention of peer scientists and are often used to explore the hotspots and research frontiers of a research field [
61,
62]. Keywords burst detection was carried out to tracking the research hotspots and determine the research trends in phytomining. In this research, a total of 25 bursty keywords were identified in the keyword co-occurrence network, and keywords with high burstiness were identified and are listed in
Table 6.
Phytomining is a new mining technology that obtains valuable metals from a contaminated environment with the use of specific plants. Therefore, gold, as a high-value metal, was detected as the first keyword, with a strong citation burst and a burst strength of 1.6139 in the period 1999 to 2007. Later, resource-related keywords such as zinc, biomass, metals, heavy metals, nickel, trace elements, and nickel hyperaccumulation also became hot research topics in 2000, 2003, 2003, 2006, 2011, 2016, and 2017, respectively. The main reason is that resource recovery is the target of phytomining. As they are tools to harvest resources from polluted environments, plant species were sure to be hot research topics in phytomining. B. coddii, as an essential Ni-hyperaccumulator, became a hot topic from 2003 to 2004, with a burst strength of 2.3504. Keywords related to plants such as Arabidopsis helleri, plants, flora, and Brassicaceae also became hot research topics in 2004, 2012, 2013, and 2017, respectively. Plants harvest metals in various ways, and phytoextraction, phytoremediation, phytomining, extraction, and agromining have also naturally become hot spots in phytomining research. In particular, agromining, as it has greatly expanded the application of phytomining, has attracted wide attention in the past three years (2016–2019) and has become the latest research hot spot, with the second strongest burst strength of 4.5717. In addition, there are also some research hotspots in phytoremediation mechanisms and metal sources, such as tolerance mechanisms, cellular compartmentation, contaminated soil, and serpentine soil. The ultimate goal of phytomining is the commercial utilization of metals, biomass, and other resources. With the gradual maturation of phytoremediation and phytomining technology, consequently, the commercial phytoextraction of metals and the integrated phytomining process will continue to be hot topics in the field of phytomining.