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Automatic Segmentation of Human Cortical Layer-Complexes and Architectural Areas Using Ex vivo Diffusion MRI and Its Validation

Bastiani, Matteo ; Oros-Peusquens, Ana-Maria ; Seehaus, Arne ; Brenner, Daniel ; Möllenhoff, Klaus ; Celik, Avdo ; Felder, Jörg ; Bratzke, Hansjürgen ; Shah, Nadim J. ; Galuske, Ralf ; Goebel, Rainer ; Roebroeck, Alard (2023)
Automatic Segmentation of Human Cortical Layer-Complexes and Architectural Areas Using Ex vivo Diffusion MRI and Its Validation.
In: Frontiers in Neuroscience, 2016, 10
doi: 10.26083/tuprints-00017053
Article, Secondary publication, Publisher's Version

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Item Type: Article
Type of entry: Secondary publication
Title: Automatic Segmentation of Human Cortical Layer-Complexes and Architectural Areas Using Ex vivo Diffusion MRI and Its Validation
Language: English
Date: 5 December 2023
Place of Publication: Darmstadt
Year of primary publication: 2016
Place of primary publication: Lausanne
Publisher: Frontiers Media S.A.
Journal or Publication Title: Frontiers in Neuroscience
Volume of the journal: 10
Collation: 11 Seiten
DOI: 10.26083/tuprints-00017053
Corresponding Links:
Origin: Secondary publication DeepGreen
Abstract:

Recently, several magnetic resonance imaging contrast mechanisms have been shown to distinguish cortical substructure corresponding to selected cortical layers. Here, we investigate cortical layer and area differentiation by automatized unsupervised clustering of high-resolution diffusion MRI data. Several groups of adjacent layers could be distinguished in human primary motor and premotor cortex. We then used the signature of diffusion MRI signals along cortical depth as a criterion to detect area boundaries and find borders at which the signature changes abruptly. We validate our clustering results by histological analysis of the same tissue. These results confirm earlier studies which show that diffusion MRI can probe layer-specific intracortical fiber organization and, moreover, suggests that it contains enough information to automatically classify architecturally distinct cortical areas. We discuss the strengths and weaknesses of the automatic clustering approach and its appeal for MR-based cortical histology.

Uncontrolled Keywords: diffusion MRI, cortical layers and areas, ultra-high field MRI, MR-based histology, histological validation
Status: Publisher's Version
URN: urn:nbn:de:tuda-tuprints-170536
Classification DDC: 500 Science and mathematics > 570 Life sciences, biology
600 Technology, medicine, applied sciences > 610 Medicine and health
Divisions: 10 Department of Biology > Systems Neurophysiology
Date Deposited: 05 Dec 2023 13:42
Last Modified: 07 Dec 2023 12:04
SWORD Depositor: Deep Green
URI: https://tuprints.ulb.tu-darmstadt.de/id/eprint/17053
PPN: 513689796
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