Pass-Efficient Algorithms for Graph Spectral Clustering (Student Abstract)

Authors

  • Boshen Yan Department of Dermatology, Massachusetts General Hospital, Harvard Medical School Department of Biomedical Informatics, Harvard Medical School
  • Guihong Wan Department of Dermatology, Massachusetts General Hospital, Harvard Medical School Laboratory of Systems Pharmacology, Department of Systems Biology, Harvard Medical School
  • Haim Schweitzer Department of Computer Science, University of Texas at Dallas
  • Zoltan Maliga Laboratory of Systems Pharmacology, Department of Systems Biology, Harvard Medical School
  • Sara Khattab Department of Dermatology, Massachusetts General Hospital, Harvard Medical School
  • Kun-Hsing Yu Department of Biomedical Informatics, Harvard Medical School
  • Peter K. Sorger Laboratory of Systems Pharmacology, Department of Systems Biology, Harvard Medical School
  • Yevgeniy R. Semenov Department of Dermatology, Massachusetts General Hospital, Harvard Medical School Laboratory of Systems Pharmacology, Department of Systems Biology, Harvard Medical School

DOI:

https://doi.org/10.1609/aaai.v38i21.30528

Keywords:

Knowledge Discovery, Data Mining, Computational Biology

Abstract

Graph spectral clustering is a fundamental technique in data analysis, which utilizes eigenpairs of the Laplacian matrix to partition graph vertices into clusters. However, classical spectral clustering algorithms require eigendecomposition of the Laplacian matrix, which has cubic time complexity. In this work, we describe pass-efficient spectral clustering algorithms that leverage recent advances in randomized eigendecomposition and the structure of the graph vertex-edge matrix. Furthermore, we derive formulas for their efficient implementation. The resulting algorithms have a linear time complexity with respect to the number of vertices and edges and pass over the graph constant times, making them suitable for processing large graphs stored on slow memory. Experiments validate the accuracy and efficiency of the algorithms.

Published

2024-03-24

How to Cite

Yan, B., Wan, G., Schweitzer, H., Maliga, Z., Khattab, S., Yu, K.-H., Sorger, P. K., & Semenov, Y. R. (2024). Pass-Efficient Algorithms for Graph Spectral Clustering (Student Abstract). Proceedings of the AAAI Conference on Artificial Intelligence, 38(21), 23690-23692. https://doi.org/10.1609/aaai.v38i21.30528