Citation:

PANGAEA.905212

Name: CARD-FISH cell counts of taxonomic bacterial and archaeal groups in Fram Strait during PS99.2
Published: 2019-08-26
License: https://creativecommons.org/licenses/by/4.0/
Keywords: CARD-FISH; cell counts; Fram Strait; seawater

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Abstract:

With CARD-FISH we quantified 16 microbial taxonomic groups in different water depths, from surface to the deep sea. We investigated 11 stations in LTER-HAUSGARTEN and adjacent stations in Fram Strait.

Keyword(s):

CARD-FISH; cell counts; Fram Strait; seawater

Pala, Claudia; Bienhold, Christina; Boetius, Antje; Salman-Carvalho, Verena: CARD-FISH cell counts of Bacteria and Archaea in sediments of HAUSGARTEN, Fram Strait, from Polarstern cruise PS85. PANGAEA, https://doi.pangaea.de/10.1594/PANGAEA.905210

Salman-Carvalho, Verena (2019): CARD-FISH counts of the water column and sediment at HAUSGARTEN, Fram Strait. PANGAEA, https://doi.org/10.1594/PANGAEA.903569

Coverage:

Median Latitude: 79.228867 * Median Longitude: 2.785411 * South-bound Latitude: 78.816000 * West-bound Longitude: -5.409330 * North-bound Latitude: 79.921170 * East-bound Longitude: 6.088500

Date/Time Start: 2016-06-26T04:57:00 * Date/Time End: 2016-07-10T02:23:00

Minimum DEPTH, water: 13 m * Maximum DEPTH, water: 5500 m

Event(s):

PS99/042-1 (HG_IV) * Latitude: 79.066000 * Longitude: 4.184330 * Date/Time: 2016-06-26T04:57:00 * Elevation: -2457.9 m * Location: North Greenland Sea * Campaign: (ARK-XXX/1.2) * Basis: * Method/Device: (CTD-RO_UVP)

PS99/042-11 (HG_IV) * Latitude: 79.065170 * Longitude: 4.172830 * Date/Time: 2016-06-27T02:36:00 * Elevation: -2468.0 m * Location: North Greenland Sea * Campaign: (ARK-XXX/1.2) * Basis: * Method/Device: (CTD-RO)

PS99/044-1 (HG_V) * Latitude: 79.067170 * Longitude: 3.665330 * Date/Time: 2016-06-28T05:16:00 * Elevation: -3081.9 m * Location: North Greenland Sea * Campaign: (ARK-XXX/1.2) * Basis: * Method/Device: (CTD-RO)

Parameter(s):

#	Name	Short Name	Unit	Principal Investigator	Method/Device	Comment
1	Event label	Event		Salman-Carvalho, Verena
2	DEPTH, water	Depth water	m	Salman-Carvalho, Verena		Geocode
3	Microbial abundance, cells	Microbial abund	#/ml	Salman-Carvalho, Verena	Fluorescence determination of DAPI stain
4	Bacteria, targed with EUB338(I-III) oligonucleotide FISH-probe	EUB338 I-III	#/ml	Salman-Carvalho, Verena	Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
5	Archaea, targed with ARCH915 oligonucleotide FISH-probe	ARCH915	#/ml	Salman-Carvalho, Verena	Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
6	Gammaproteobacteria, targeted with Gam42a oligonucleotide FISH-probe	Gam42a	#/ml	Salman-Carvalho, Verena	Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
7	Deltaproteobacteria, targeted with the DELTA495 mix oligonucleotide FISH-probes	DELTA495 mix	#/ml	Salman-Carvalho, Verena	Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
8	Bacteroidetes, targeted with CF968 oligonucleotides FISH-probe	CF968	#/ml	Salman-Carvalho, Verena	Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
9	Chloroflexi, targeted with CFX1223 and GNSB941 oligonucleotides FISH-probe	CFX1223 + GNSB941	#/ml	Salman-Carvalho, Verena	Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
10	Verrucomicrobiales, targeted with EUB338 III oligonucleotides FISH-probe	EUB338 III	#/ml	Salman-Carvalho, Verena	Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
11	SAR11 mix oligonucleotide FISH-probes targeting SAR11 clade	SAR11	#/ml	Salman-Carvalho, Verena	Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
12	Pseudoalteromonas, targeted with PSA184 oligonucleotide FISH-probe	PSA184	#/ml	Salman-Carvalho, Verena	Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
13	SAR202 clade, targeted with SAR202-312R oligonucleotide FISH-probe	SAR202-312R	#/ml	Salman-Carvalho, Verena	Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
14	SAR406 clade, targeted with SAR406-97 oligonucleotide FISH-probe	SAR406	#/ml	Salman-Carvalho, Verena	Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
15	SAR324 Marine group B, targeted with SAR324-R-625 oligonucleotide FISH-probe	SAR324-R-625	#/ml	Salman-Carvalho, Verena	Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
16	Opitutales, targeted with OPI346 oligonucleotides FISH-probe	OPI346	#/ml	Salman-Carvalho, Verena	Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
17	Crenarchaeota marine group I, targeted with Cren554 oligonucleotide FISH-probe	Cren554	#/ml	Salman-Carvalho, Verena	Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
18	Polaribacter, targeted with POL740 oligonucleotides FISH-probe	POL740	#/ml	Salman-Carvalho, Verena	Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH)
19	Rhodobacteraceae, targeted with ROS536 oligonucleotides FISH-probe	ROS536	#/ml	Salman-Carvalho, Verena	Catalysed reporter deposition-fluorescence in situ hybridization (CARD-FISH)

License:

Creative Commons Attribution 4.0 International (CC-BY-4.0)

Size:

748 data points

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