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Francis Pan, T C; Applebaum, Scott L; Manahan, Donal T (2015): Experimental ocean acidification alters the allocation of metabolic energy [dataset]. PANGAEA, https://doi.org/10.1594/PANGAEA.847832, Supplement to: Francis Pan, TC et al. (2015): Experimental ocean acidification alters the allocation of metabolic energy. Proceedings of the National Academy of Sciences, 112(15), 4696-4701, https://doi.org/10.1073/pnas.1416967112

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Abstract:
Energy is required to maintain physiological homeostasis in response to environmental change. Although responses to environmental stressors frequently are assumed to involve high metabolic costs, the biochemical bases of actual energy demands are rarely quantified. We studied the impact of a near-future scenario of ocean acidification [800 µatm partial pressure of CO2 (pCO2)] during the development and growth of an important model organism in developmental and environmental biology, the sea urchin Strongylocentrotus purpuratus. Size, metabolic rate, biochemical content, and gene expression were not different in larvae growing under control and seawater acidification treatments. Measurements limited to those levels of biological analysis did not reveal the biochemical mechanisms of response to ocean acidification that occurred at the cellular level. In vivo rates of protein synthesis and ion transport increased 50% under acidification. Importantly, the in vivo physiological increases in ion transport were not predicted from total enzyme activity or gene expression. Under acidification, the increased rates of protein synthesis and ion transport that were sustained in growing larvae collectively accounted for the majority of available ATP (84%). In contrast, embryos and prefeeding and unfed larvae in control treatments allocated on average only 40% of ATP to these same two processes. Understanding the biochemical strategies for accommodating increases in metabolic energy demand and their biological limitations can serve as a quantitative basis for assessing sublethal effects of global change. Variation in the ability to allocate ATP differentially among essential functions may be a key basis of resilience to ocean acidification and other compounding environmental stressors.
Keyword(s):
Animalia; Containers and aquaria (20-1000 L or < 1 m**2); Echinodermata; Gene expression (incl. proteomics); Growth/Morphology; Laboratory experiment; Not applicable; Pelagos; Respiration; Single species; Strongylocentrotus purpuratus; Zooplankton
Further details:
Gattuso, Jean-Pierre; Epitalon, Jean-Marie; Lavigne, Héloïse (2015): seacarb: seawater carbonate chemistry with R. R package version 3.0.6. https://cran.r-project.org/package=seacarb
Comment:
In order to allow full comparability with other ocean acidification data sets, the R package seacarb (Gattuso et al, 2015) was used to compute a complete and consistent set of carbonate system variables, as described by Nisumaa et al. (2010). In this dataset the original values were archived in addition with the recalculated parameters (see related PI). The date of carbonate chemistry calculation is 2015-07-03.
Parameter(s):
#NameShort NameUnitPrincipal InvestigatorMethod/DeviceComment
1SpeciesSpeciesManahan, Donal T
2TreatmentTreatManahan, Donal T
3Feeding modeFeeding mManahan, Donal T
4AgeAgedaysManahan, Donal T
5Body lengthBLmmManahan, Donal T
6Body length, standard deviationBL std dev±Manahan, Donal T
7Respiration rate, oxygen, per individualResp O2/indpmol/#/hManahan, Donal T
8Respiration rate, oxygen, standard deviationResp O2 std dev±Manahan, Donal T
9Proteins, synthesis rate, per individualProtein synthesis/indng/#/hManahan, Donal T
10Proteins, synthesis rate, standard deviationProtein synthesis std dev±Manahan, Donal T
11PercentagePerc%Manahan, Donal TATP allocation to protein synthesis
12In vivo Sodium, Potassium, adenosine triphosphatase activity per individualIn vivo Na+ K+ ATPase act/per indpmol/#/hManahan, Donal T
13PercentagePerc%Manahan, Donal TATP allocation to Na+,K+ ATPase
14PercentagePerc%Manahan, Donal Tunaccounted fraction
15Protein nameProteinManahan, Donal T
16ProteinsProteinnmolManahan, Donal T
17Proteins, standard deviationProtein std dev±Manahan, Donal T
18ProteinsProteinnmolManahan, Donal Tgrand mean
19Proteins, standard deviationProtein std dev±Manahan, Donal Tgrand
20PercentagePerc%Manahan, Donal Tcomposition of protein, mol percent
21Temperature, waterTemp°CManahan, Donal T
22Temperature, water, standard errorT std e±Manahan, Donal T
23pHpHManahan, Donal TPotentiometricNBS scale
24pH, standard errorpH std e±Manahan, Donal TPotentiometricNBS scale
25SalinitySalManahan, Donal T
26Carbon, inorganic, dissolvedDICµmol/kgManahan, Donal TCoulometric titration
27Carbon, inorganic, dissolved, standard errorDIC std e±Manahan, Donal TCoulometric titration
28Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmManahan, Donal T
29Partial pressure of carbon dioxide (water) at sea surface temperature (wet air), standard errorpCO2water_SST_wet std e±Manahan, Donal TCalculated using CO2SYS
30Calcite saturation stateOmega CalManahan, Donal TCalculated using CO2SYS
31Calcite saturation state, standard errorOmega Cal std e±Manahan, Donal TCalculated using CO2SYS
32Aragonite saturation stateOmega ArgManahan, Donal TCalculated using CO2SYS
33Aragonite saturation state, standard errorOmega Arg std e±Manahan, Donal TCalculated using CO2SYS
34Alkalinity, totalATµmol/kgManahan, Donal TCalculated using CO2SYS
35Alkalinity, total, standard errorAT std e±Manahan, Donal TCalculated using CO2SYS
36Carbonate ion[CO3]2-µmol/kgManahan, Donal TCalculated using CO2SYS
37Carbonate ion, standard error[CO3]2- std e±Manahan, Donal TCalculated using CO2SYS
38Carbonate system computation flagCSC flagYang, YanCalculated using seacarb after Nisumaa et al. (2010)
39pHpHYang, YanCalculated using seacarb after Nisumaa et al. (2010)total scale
40Carbon dioxideCO2µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
41Fugacity of carbon dioxide (water) at sea surface temperature (wet air)fCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
42Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)pCO2water_SST_wetµatmYang, YanCalculated using seacarb after Nisumaa et al. (2010)
43Bicarbonate ion[HCO3]-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
44Carbonate ion[CO3]2-µmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
45Alkalinity, totalATµmol/kgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
46Aragonite saturation stateOmega ArgYang, YanCalculated using seacarb after Nisumaa et al. (2010)
47Calcite saturation stateOmega CalYang, YanCalculated using seacarb after Nisumaa et al. (2010)
Status:
Curation Level: Enhanced curation (CurationLevelC)
Size:
4876 data points

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