Persistent Identifier
|
doi:10.15454/EYABB2 |
Publication Date
|
2021-02-14 |
Title
| T2 relaxation time raw data of water-imbibed Arabidopsis seeds - dataset 2 |
Point of Contact
|
Use email button above to contact.
Rondeau-Mouro, Corinne (INRA - Institut National de la Recherche Agronomique)
North, Helen M. (INRA - Institut National de la Recherche Agronomique) |
Author
| Rondeau-Mouro, Corinne (INRA - Institut National de la Recherche Agronomique) - ORCID: 0000-0002-8573-1050
Cambert, Mireille (INRA)
Esling, Stéphanie (INRA)
Sallé, Christine (INRA)
North, Helen M. (INRA) - ORCID: 0000-0002-5749-2603 |
Producer
| UR OPAALE (INRAE) https://opaale.rennes.hub.inrae.fr/ur-opaale |
Description
| The dataset_2 comprises NMR raw data acquired on 19 accessions having atypical outer mucilage properties (Fabrissin et al., 2019). Accessions are from the Versailles Arabidopsis stock center (http://publiclines.inra.fr/naturalAccession/index) and are listed by their Versailles identification number in a four-digit format. Seed lots were produced from plants in two cultivations series c or d. Each raw data file is identified by a name which is the combination of the seed lot (lot2), the cultivation serie (C or D) followed by “imb-“, the imbibition time (t0 or H23) and the accession code. Data correspond to intact seeds imbibed in water (code 6). Data were recorded using a Time-Domain spectrometer (Minispec BRUKER, Germany) operating at 0.47T (resonance frequency of 20 MHz) at 20°C. The FID-CPMG sequence was used using the following parameters : a 90° pulse close to 2.8 µs, a dwell time of 0.4 µs for a FID duration of 60 µs, 16 scans, a recycle delay of 5 s, an echo time of 0.2 ms with 8000 or 5000 data points, depending on the imbibition time. (2020-05-05) |
Language
| French |
Subject
| Earth and Environmental Sciences |
Keyword
| TD-NMR (Time Domain Nuclear Magnetic Resonance)
mucilage |
Topic Classification
| Biodiversity and Ecology |
Data Type
| Dataset |
Data Origin
| experimental data |
Life cycle step
| Final report |
Related Publication
| Local Evolution of Seed Flotation in Arabidopsis PLoS Genetics 10.1371/journal.pgen.1004221 doi: |
Related Dataset
| Cambert, Mireille; Berger, Adeline; Sallé, Christine; Esling, Stéphanie; Charif, Delphine; Cadoret, Tudel; Ralet, Marie-Christine; North, Helen M.; Rondeau-Mouro, Corinne, 2021, "Seed mucilage traits for Arabidopsis thaliana natural accessions with atypical outer mucilage - dataset 1": 10.15454/1MZ1ZC https://doi.org/10.15454/1MZ1ZC
Berger, Adeline; Sallé, Christine; North, Helen M., 2021, "Measurements of inner mucilage and seed width for Arabidopsis natural accessions - dataset 3": 10.15454/LBUN4X https://doi.org/10.15454/LBUN4X
Poulain, Damien; Botran, Lucy; North, Helen; Ralet, Marie-Christine, 2019, "Composition and physicochemical properties of outer mucilage from seeds of Arabidopsis natural accessions":: 10.15454/Z4JM4F https://doi.org/10.15454/Z4JM4F |
Other Reference
| Fabrissin I, Cueff G, Berger A, Granier F, Sallé C, Poulain D, Ralet M-C, North HM. (2019) Natural variation reveals a key role for rhamnogalacturonan I in seed outer mucilage and pinpoints underlying genes. Plant Physiol. 181: 1498-1518.; Poulain D, Botran L, North HM, Ralet M-C (2019) Composition and physicochemical properties of outer mucilage from seeds of Arabidopsis natural accessions. AoB PLANTS 11: plz031;; Saez-Aguayo S, Rondeau-Mouro C, Macquet A, Kronholm I, Ralet MC, Berger A, Sallé C, Poulain D, Granier F, Botran L, et al (2014) Local evolution of seed flotation in Arabidopsis. PLoS Genet 10: e1004221 |
Funding Information
| ANR: ANR-14-CE19-0001 |
Project Information
| CEMMU (Consequences of environmental modifications on Arabidopsis seed mucilage properties, diversity and ecophysiological function) . WP WP2 |
Depositor
| Rondeau-Mouro, Corinne |
Deposit Date
| 2020-05-05 |