In this paper, we describe an improvement of a calculation procedure of logic programs. The procedure proposed before is the combination of a replacement procedure of logical formulae and a transformation procedure of equations to disjunctive normal form, and it can calculate logical consequences of the completion of any given first-order logic program (FLP), which is equivalent to the FLP in two-valued logic, soundly and completely in three-valued logic. The new procedure is also the combination of them, but the transformation procedure is improved to be able to calculate two-valued logical consequences of the FLP more than the old one. We prove that it can calculate logical consequences of a completed program, which is not equivalent to the completion of the FLP, soundly and completely in three-valued logic.