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Genome-Wide Identification of Hsp40 Genes in Channel Catfish and Their Regulated Expression after Bacterial Infection

Figure 3

Schematic presentation of the conserved synteny blocks neighboring DnaJc3 (A) and DnaJc3-prkri gene (B).

Note that in each case, the gene order and orientation was relatively conserved. Abbreviations: (A) CLDN10, claudin 10; rnf17, ring finger protein 17; DnaJc3, DnaJ (Hsp40) homolog, subfamily C, member 3; uggt2, UDP-glucose glycoprotein glucosyltransferase 2; hs6st3b, heparan sulfate 6-O-sulfotransferase 3b; oxyr1b, oxoglutarate (alpha-ketoglutarate) receptor 1b; RNF113B, ring finger protein 113B. (B) tmem88b, transmembrane protein 88 b; fis1, fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae); cldn15a, claudin 15a; dnajc3 prkri, protein-kinase, interferon-inducible double stranded RNA dependent inhibitor; cyb5d1, cytochrome b5 domain containing 1; chd3, chromodomain helicase DNA binding protein 3; tnfsf12, tumor necrosis factor (ligand) superfamily, member 12.

Figure 3

doi: https://doi.org/10.1371/journal.pone.0115752.g003