OTG-snpcaller: An Optimized Pipeline Based on TMAP and GATK for SNP Calling from Ion Torrent Data
Figure 5
Venn diagrams of WGS, TVC high stringency, TVC low stringency and OTG-snpcaller.
(A) Data from the TP00005 library. (B) Data from the TP00010 library. OTG-snpcaller exhibits more overlap (above 75%) with YH-WGS than both TVC high stringency and TVC low stringency.