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Exploiting a Reduced Set of Weighted Average Features to Improve Prediction of DNA-Binding Residues from 3D Structures

Figure 4

Prediction results shown on 1JKO using four different rank-based methods.

(A) Interface propensity-based method. (B) Weighted average interface propensity-based method. (C) Betweenness centrality-based method. (D) Weighted average betweenness centrality-based method. Colors of different residues are defined as follows: green denotes true positives (TP), blue denotes false positives (FP), orange denotes true negatives (TN), and red denotes false negatives (FN). Purple cartoon denotes the DNA molecules.

Figure 4

doi: https://doi.org/10.1371/journal.pone.0028440.g004