Identification of Local Conformational Similarity in Structurally Variable Regions of Homologous Proteins Using Protein Blocks
Figure 2
Difference in distribution of nature of aligned PBs observed after re-alignment of SVRs compared to the original alignment.
Various colors indicate the extent of differences in the number of various PB-PB equivalences between bSVRs and aSVRs. Blue color indicates a decrease and red color indicates an increase in the number of corresponding PB equivalences in aSVRs compared to bSVRs. The other colors indicate intermediate values.The values in the top diagonal of the matrix have been normalized by the number of PBs as denoted in x axis. Similarly, the values in the bottom diagonal have been normalized by the number of PBs as denoted in the y axis.