Automatic Prediction of Protein 3D Structures by Probabilistic Multi-template Homology Modeling
Table 1
Average model quality scores for different variations of template selection strategies and restraints used with Modeller on a test set of 1000 single- and multi-domain proteins in the pdb20 database.
The GDC-all score is similar to GDT-ha but also includes side-chain atoms in its assessment. Percent improvements are with respect to the first line. P-values are calculated based on a paired t-test with respect to the GDT-ha score in the previous line.