Abstract—
A method has been developed for the immobilization of short DNA sequences in agarose cells fixed on the surface of a polymer substrate, with their subsequent partial cleavage from agarose when heated while protecting functional properties. The effectiveness of the method was demonstrated on oligonucleotides, which, after cleavage from agarose, retained the ability to participate as primers in the PCR amplification of the sequence site 7 of the exon of the human ABO gene.
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REFERENCES
Gryadunov, D., Dementieva, E., Mikhailovich, V., Nasedkina, T., Rubina, A., Savvateeva, E., Fesenko, E., Chudinov, A., Zimenkov, D., Kolchinsky, A., and Zasedatelev, A., Expert Rev. Mol. Diagn., 2011, vol. 11, pp. 839–853. https://doi.org/10.1586/erm.11.73
Mardis, E.R., Annu. Rev. Anal. Chem., 2013, vol. 6, pp. 287–303. https://doi.org/10.1146/annurev-anchem-062012-092628
Andreadis, J.D. and Chrisey, L.A., Nucleic Acid Res., 2000, vol. 28, p. e5. https://doi.org/10.1093/nar/28.2.e5
Wu, Z., Bai, Y., Cheng, Z., Liu, F., Wang, P., Yang, D., Li, G., Jin, Q., Mao, H., and Zhao, J., Biosens. Bioelectron., 2017, vol. 96, pp. 339–344. https://doi.org/10.1016/j.bios.2017.05.021
Ahrberg, C.D., Manz, A., and Chung, B.G., Lab on Chip, 2016, vol. 16, pp. 3866–3884. https://doi.org/10.1039/c6lc00984k
Primiceri, E., Chiriaco, M.C., Notarangelo, F.M., Crocamo, A., Ardissino, D., Cereda, M., Bramanti, A.P., Bianchessi, M.A., Giannelli, G., and Maruccio, G., Sensors, 2018, vol. 18, p. 3607. https://doi.org/10.3390/s18113607
English, M.A., Soenksen, L.R., Gayet, R.V., de Puig, H., Angenent-Mari, N.M., Mao, A.S., Nguyen, P.Q., and Collins, J.J., Science, 2019, vol. 365, pp. 780–785. https://doi.org/10.1126/science.aaw5122
Pinkus, A.G. and Subramanyam, R., J. Polym. Sci. A Polym. Chem., 1984, vol. 22, pp. 1131–1140. https://doi.org/10.1002/pol.1984.170220513
Miftaxov R.A., Lapa C.A., Shepshov V.E., Zacedateleva O.A., Guceinov T.O., Cpitsyn M.A., Kuznetsova V.E., Mamaev D.D., Lycov Yu.P., Bapckii V.E., Timofeev E.N., Zacedatelev A.C., and Chudinov A.V., Biofizika (Biophysics), 2018, vol. 63, pp. 661–668 (in Russ.). https://doi.org/10.1134/S000630291804004X
Miftakhov, R.A., Lapa, S.A., Kuznetsova, V.E., Zolotov, A.M., Vasiliskov, V.A., Shershov, V.E., Surzhikov, S.A., Zasedatelev, A.S., and Chudinov, A.V., Russ. J. Bioorg. Chem., 2021, vol. 47, pp. 1345–1347. https://doi.org/10.1134/S1068162021060182
Lysov, Yu., Barsky, V., Urasov, D., Urasov, R., Cherepanov, A., Mamaev, D., Yegorov, Ye., Chudinov, A., Surzhikov, S., Rubina, A., Smoldovskaya, O., and Zasedatelev, A., Biomed. Opt. Express, 2017, vol. 8, p. 114798. https://doi.org/10.1364/BOE.8.004798
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This work was supported by the Russian Foundation for Basic Research (project no. 20-04-00680).
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Abbreviations: PET, polyethylene terephthalate; COC, cyclic olefin copolymer.
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Zolotov, A.M., Miftakhov, R.A., Ikonnikova, A.Y. et al. Biochip with Agarose Microcells Containing Thermally Separable Primers. Russ J Bioorg Chem 48, 858–863 (2022). https://doi.org/10.1134/S1068162022040203
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DOI: https://doi.org/10.1134/S1068162022040203