Issue 4, 1977

The phosphotriester approach to oligonucleotide synthesis: preparation of oligo- and poly-thymidylic acids

Abstract

Fully-protected phospholriester derivatives of (Tp)3T, (Tp)7T, (Tp)15T, and (Tp)31T (18a; n= 2, 6, 14, and 30, respectively) were obtained in satisfactory yields by block synthesis. In all cases, stoicheiometric quantities of two starting materials (18b and c), each of which contained the same number of thymidine residues, were used. Phosphorylations were carried out in two steps with phenyl dihydrogen phosphate (16) and 2,4,6-tri-isopropyl-benzenesulphonyl chloride (7b) in pyridine solution. Fully-protected TpT. (Tp)3T, (Tp)7T, and (Tp)15T (18a; n= 0, 2, 6, and 14, respectively) were converted into the corresponding unblocked oligothymidylic acids (21; n= 0, 2, 6, and 14, respectively) which were further purified by DEAE-cellulose or -Sephadex chromatography. In order to avoid terminal phosphoryl migration, the fully protected intermediates (18a) were converted into the corresponding tetrahydropyranyl derivatives (19) before they were submitted to alkaline hydrolysis to unblock the internucleotide phosphodiester linkages. The latter alkaline hydrolysis step led to ca. 3% cleavage per phospho-triester group and thus the phenyl protecting group or the present unblocking procedure is unsuitable for the preparation of oligonucleotides containing more than ca. 20 nucleotide residues.

Article information

Article type
Paper

J. Chem. Soc., Perkin Trans. 1, 1977, 445-460

The phosphotriester approach to oligonucleotide synthesis: preparation of oligo- and poly-thymidylic acids

R. Arentzen and C. B. Reese, J. Chem. Soc., Perkin Trans. 1, 1977, 445 DOI: 10.1039/P19770000445

To request permission to reproduce material from this article, please go to the Copyright Clearance Center request page.

If you are an author contributing to an RSC publication, you do not need to request permission provided correct acknowledgement is given.

If you are the author of this article, you do not need to request permission to reproduce figures and diagrams provided correct acknowledgement is given. If you want to reproduce the whole article in a third-party publication (excluding your thesis/dissertation for which permission is not required) please go to the Copyright Clearance Center request page.

Read more about how to correctly acknowledge RSC content.

Spotlight

Advertisements