Issue 34, 2022

Crystal structure prediction of N-halide phthalimide compounds: halogen bonding synthons as a touchstone

Abstract

We address the crystal structure prediction problem by combining the evolutionary algorithm USPEX (used to predict sets of low-energy crystal structures) and the synthon approach (extracting preferable supramolecular synthons from the Cambridge Structural Database, CSD, and then indicating the most stable structure as well as the most likely metastable polymorphs among the predicted low-energy structures with synthons). This approach is applied to three compounds: N-chlorophthalimide (ncp), N-bromophthalimide (nbp), and N-iodophthalimide (nip). Database search has indicated the importance of halogen bonding N–X⋯O[double bond, length as m-dash]C synthons (X = Cl, Br, I) as a touchstone. The predicted structures of ncp of rank 1 and nbp of rank 3 match the experimental ones. Our results imply that the synthon approach can successfully suggest the right structures amongst a handful of lowest-energy predicted structures. Two candidate crystal structures were suggested using the synthon approach for nip.

Graphical abstract: Crystal structure prediction of N-halide phthalimide compounds: halogen bonding synthons as a touchstone

Supplementary files

Article information

Article type
Paper
Submitted
05 Apr 2022
Accepted
08 Jul 2022
First published
21 Jul 2022

CrystEngComm, 2022,24, 6066-6075

Crystal structure prediction of N-halide phthalimide compounds: halogen bonding synthons as a touchstone

Z. Momenzadeh Abardeh, A. Salimi and A. R. Oganov, CrystEngComm, 2022, 24, 6066 DOI: 10.1039/D2CE00476C

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