Skip to main content

Advertisement

Log in

Significance of temperature and water availability for soil phosphorus transformation and microbial community composition as affected by fertilizer sources

  • Original Paper
  • Published:
Biology and Fertility of Soils Aims and scope Submit manuscript

Abstract

Little is known about the effects of temperature and drying–rewetting on soil phosphorus (P) fractions and microbial community composition in regard to different fertilizer sources. Soil P dynamics and microbial community properties were evaluated in a soil not fertilized or fertilized with KH2PO4 or swine manure at two temperatures (10 and 25 °C) and two soil water regimes (continuously moist and drying–rewetting cycles) in laboratory microcosm assays. The P source was the dominant factor determining the sizes of labile P fractions and microbial community properties. Manure fertilization increased the content of labile P, microbial biomass, alkaline phosphomonoesterase activity, and fatty acid contents, whereas KH2PO4 fertilization increased the content of labile inorganic P and microbial P. Water regimes, second to fertilization in importance, affected more labile P pools, microbial biomass, alkaline phosphomonoesterase activity, and fatty acid contents than temperature. Drying–rewetting cycles increased labile P pools, decreased microbial biomass and alkaline phosphomonoesterase activity, and shaped the composition of microbial communities towards those with greater percentages of unsaturated fatty acids, particularly at 25 °C in manure-fertilized soils. Microbial C and P dynamics responded differentially to drying–rewetting cycles in manure-fertilized soils but not in KH2PO4-fertilized soils, suggesting their decoupling because of P sources and water regimes. Phosphorus sources, temperature, and water regimes interactively affected the labile organic P pool in the middle of incubation. Overall, P sources and water availability had greater effects on P dynamics and microbial community properties than temperature.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5
Fig. 6
Fig. 7
Fig. 8

Similar content being viewed by others

References

  • Achat DL, Augusto L, Gallet-Budynek A, Bakker MR (2012) Drying-induced changes in phosphorus status of soils with contrasting soil organic matter contents—implications for laboratory approaches. Geoderma 187–188:41–48

    Article  Google Scholar 

  • Arai Y, Sparks D (2007) Phosphate reaction dynamics in soils and soil components: a multiscale approach. Adv Agron 94:135–179

    Article  CAS  Google Scholar 

  • Beauregard MS, Hamel C, Atul-Nayyar, Starnaud M (2010) Long-term phosphorus fertilization impacts soil fungal and bacterial diversity but not AM fungal community in alfalfa. Microb Ecol 59:379–389

    Article  CAS  PubMed  Google Scholar 

  • Bell CW, Acosta-Martinez V, McIntyre NE, Cox S, Tissue DT, Zak JC (2009) Linking microbial community structure and function to seasonal differences in soil moisture and temperature in a Chihuahuan desert grassland. Microb Ecol 58:827–842

    Article  CAS  PubMed  Google Scholar 

  • Blackwell MSA, Brookes P, de la Fuente-Martinez N, Murray P, Snars K, Williams J, Haygarth P (2009) Effects of soil drying and rate of re-wetting on concentrations and forms of phosphorus in leachate. Biol Fertil Soils 45:635–643

    Article  Google Scholar 

  • Blackwell MSA, Brookes RC, de la Fuente-Martinez N, Gordon H, Murray PJ, Snars KE, Williams JK, Bol R, Haygarth PM (2010) Phosphorus solubilization and potential transfer to surface waters from the soil microbial biomass following drying-rewetting and freezing-thawing. Adv Agron 106:1–35

    Article  CAS  Google Scholar 

  • Borken W, Matzner E (2008) Reappraisal of drying and wetting effects on C and N mineralization and fluxes in soils. Glob Change Biol 15:808–824

    Article  Google Scholar 

  • Brookes PC, Powlson DS, Jenkinson DS (1982) Measurement of microbial biomass phosphorus in soil. Soil Biol Biochem 14:319–329

    Article  CAS  Google Scholar 

  • Bünemann EK (2015) Assessment of gross and net mineralization rates of soil organic phosphorus—a review. Soil Biol Biochem 89:82–98

    Article  Google Scholar 

  • Bünemann EK, Bossio DA, Smithson PC, Frossard E, Oberson A (2004) Microbial community composition and substrate use in a highly weathered soil as affected by crop rotation and P fertilization. Soil Biol Biochem 36:889–901

    Article  Google Scholar 

  • Bünemann EK, Keller B, Hoop D, Jud K, Boivin P, Frossard E (2013) Increased availability of phosphorus after drying and rewetting of a grassland soil: processes and plant use. Plant Soil 370:511–526

    Article  Google Scholar 

  • Bünemann EK, Schwenke GD, Zwieten LV (2006) Impact of agricultural inputs on soil organisms—a review. Aust J Soil Res 44:379–406

    Article  Google Scholar 

  • Butterly C, Bünemann E, McNeill A, Baldock J, Marschner P (2009) Carbon pulses but not phosphorus pulses are related to decreases in microbial biomass during repeated drying and rewetting of soils. Soil Biol Biochem 41:1406–1416

    Article  CAS  Google Scholar 

  • Butterly CR, McNeill AM, Baldock JA, Marschner P (2011) Rapid changes in carbon and phosphorus after rewetting of dry soil. Biol Fertil Soils 47:41–50

    Article  CAS  Google Scholar 

  • Carter MR (1993) Soil sampling and methods of analysis. CRC Press

  • Chen CR, Condron LM, Davis MR, Sherlock RR (2003) Seasonal changes in soil phosphorus and associated microbial properties under adjacent grassland and forest in New Zealand. For Ecol Manag 177:539–557

    Article  Google Scholar 

  • Cox D, Bezdicek D, Fauci M (2001) Effects of compost, coal ash, and straw amendments on restoring the quality of eroded Palouse soil. Biol Fertil Soils 33:365–372

    Article  CAS  Google Scholar 

  • Cruz AF, Hamel C, Hanson K, Selles F, Zentner RP (2009) Thirty-seven years of soil nitrogen and phosphorus fertility management shapes the structure and function of the soil microbial community in a Brown Chernozem. Plant Soil 315:173–184

    Article  CAS  Google Scholar 

  • De Nobili M, Contin M, Brookes P (2006) Microbial biomass dynamics in recently air-dried and rewetted soils compared to others stored air-dry for up to 103 years. Soil Biol Biochem 38:2871–2881

    Article  Google Scholar 

  • Evans SE, Wallenstein MD (2012) Soil microbial community response to drying and rewetting stress: does historical precipitation regime matter? Biogeochemistry:101–116

  • Fisk M, Santangelo S, Minick K (2015) Carbon mineralization is promoted by phosphorus and reduced by nitrogen addition in the organic horizon of northern hardwood forests. Soil Biol Biochem 81:212–218

    Article  CAS  Google Scholar 

  • Frostegård A, Bååth E (1996) The use of phospholipid fatty acid analysis to estimate bacterial and fungal biomass in soil. Biol Fertil Soils 22:59–65

    Article  Google Scholar 

  • Greve P, Orlowsky B, Mueller B, Sheffield J, Reichstein M, Seneviratne SI (2014) Global assessment of trends in wetting and drying over land. Nat Geosci 7:716–721

  • Guppy C, Menzies N, Moody P, Blamey F (2005) Competitive sorption reactions between phosphorus and organic matter in soil: a review. Soil Res 43:189–202

    Article  CAS  Google Scholar 

  • Hamel C, Hanson K, Selles F, Cruz AF, Lemke R, Mcconkey B, Zentner R (2006) Seasonal and long-term resource-related variations in soil microbial communities in wheat-based rotations of the Canadian prairie. Soil Biol Biochem 38:2104–2116

    Article  CAS  Google Scholar 

  • Hamer U, Unger M, Makeschin F (2007) Impact of air-drying and rewetting on PLFA profiles of soil microbial communities. J Plant Nutr Soil Sci 170:259–264

    Article  CAS  Google Scholar 

  • Harrison-Kirk T, Beare MH, Meenken ED, Condron LM (2014) Soil organic matter and texture affect responses to dry/wet cycles: changes in soil organic matter fractions and relationships with C and N mineralisation. Soil Biol Biochem 74:50–60

    Article  CAS  Google Scholar 

  • Huang L, Fu L, Jin C, Gielen G, Lin X, Wang H, Zhang Y (2011) Effect of temperature on phosphorus sorption to sediments from shallow eutrophic lakes. Ecol Eng 37:1515–1522

    Article  Google Scholar 

  • Huang M, Jiang L, Zou Y, Xu S, Deng G (2013) Changes in soil microbial properties with no-tillage in Chinese cropping systems. Biol Fertil Soils 49:373–377

    Article  Google Scholar 

  • Kakumanu ML, Cantrell CL, Williams MA (2013) Microbial community response to varying magnitudes of desiccation in soil: a test of the osmolyte accumulation hypothesis. Soil Biol Biochem 57:644–653

    Article  CAS  Google Scholar 

  • Kakumanu ML, Williams MA (2014) Osmolyte dynamics and microbial communities vary in response to osmotic more than matric water deficit gradients in two soils. Soil Biol Biochem 79:14–24

    Article  CAS  Google Scholar 

  • Kieft T, Ringelberg D, White D (1994) Changes in ester-linked phospholipid fatty acid profiles of subsurface bacteria during starvation and desiccation in a porous medium. Appl Environ Microbiol 60:3292–3299

    CAS  PubMed  PubMed Central  Google Scholar 

  • Lagos LM, Acuña JJ, Maruyama F, Ogram A, de la Luz Mora M, Jorquera MA (2016) Effect of phosphorus addition on total and alkaline phosphomonoesterase-harboring bacterial populations in ryegrass rhizosphere microsites. Biol Fertil Soils 52:1007–1019

    Article  CAS  Google Scholar 

  • Larkin RP, Honeycutt CW, Griffin TS (2006) Effect of swine and dairy manure amendments on microbial communities in three soils as influenced by environmental conditions. Biol Fertil Soils 43:51–61

    Article  Google Scholar 

  • Leckie SE (2005) Methods of microbial community profiling and their application to forest soils. For Ecol Manag 220:88–106

    Article  Google Scholar 

  • Lukito HP, Kouno K, Ando T (1998) Phosphorus requirements of microbial biomass in a regosol and an andosol. Soil Biol Biochem 30:865–872

    Article  CAS  Google Scholar 

  • Maillard É, Angers DA (2014) Animal manure application and soil organic carbon stocks: a meta-analysis. Glob Change Biol 20:666–679

    Article  Google Scholar 

  • Nannipieri P, Giagnoni L, Landi L, Renella G (2011) Role of phosphatase enzymes in soil. In: Bünemann E, Oberson A, Frossard E (eds) Phosphorus in action: biological processes in soil phosphorus cycling. Springer, Berlin Heidelberg, Berlin, pp 215–243

    Chapter  Google Scholar 

  • Nannipieri P, Johnson RL, Paul EA (1978) Criteria for measurement of microbial growth and activity in soil. Soil Biol Biochem 10:223–229

    Article  CAS  Google Scholar 

  • Navarro-García F, Casermeiro M, Schimel JP (2012) When structure means conservation: effect of aggregate structure in controlling microbial responses to rewetting events. Soil Biol Biochem 44:1–8

    Article  Google Scholar 

  • Ng EL, Patti AF, Rose MT, Schefe CR, Smernik RJ, Cavagnaro TR (2015) Do organic inputs alter resistance and resilience of soil microbial community to drying? Soil Biol Biochem 81:58–66

    Article  CAS  Google Scholar 

  • Olsen SR, Cole C, Watanabe F, Dean L (1954) Estimation of available phosphorus in soils by extraction with sodium bicarbonate. U.S. Government Printing Office, Washington, DC

    Google Scholar 

  • Passioura JB (2006) The perils of pot experiments. Funct Plant Biol 33:1075–1079

    Article  Google Scholar 

  • Peralta AL, Ludmer S, Kent AD (2013) Hydrologic history influences microbial community composition and nitrogen cycling under experimental drying/wetting treatments. Soil Biol Biochem 66:29–37

    Article  CAS  Google Scholar 

  • Sardans J, Peñuelas J, Estiarte M (2006) Warming and drought alter soil phosphatase activity and soil P availability in a Mediterranean shrubland. Plant Soil 289:227–238

    Article  CAS  Google Scholar 

  • Sardans J, Rodà F, Peñuelas J (2005) Effects of water and a nutrient pulse supply on Rosmarinus officinalis growth, nutrient content and flowering in the field. Environ Exp Bot 53:1–11

    Article  CAS  Google Scholar 

  • Schönbrunner IM, Preiner S, Hein T (2012) Impact of drying and re-flooding of sediment on phosphorus dynamics of river-floodplain systems. Sci Total Environ 432:329–337

    Article  PubMed  PubMed Central  Google Scholar 

  • Schutter ME, Dick RP (2000) Comparison of fatty acid methyl ester (FAME) methods for characterizing microbial communities. Soil Sci Soc Am J 64:1659–1668

    Article  CAS  Google Scholar 

  • Sharma SK, Ramesh A, Sharma MP, Joshi OP, Govaerts B, Steenwerth KL, Karlen DL (2011) Microbial community structure and diversity as indicators for evaluating soil quality. In: Lichtfouse E (ed) Biodiversity, biofuels. Agroforestry and Conservation Agriculture. Springer, Dordrecht, pp 317–358

    Google Scholar 

  • Shi A, Marschner P (2015) The number of moist days determines respiration in drying and rewetting cycles. Biol Fertil Soils 51:33–41

    Article  CAS  Google Scholar 

  • Shi Y, Lalande R, Hamel C, Ziadi N, Gagnon B, Hu Z (2013) Seasonal variation of microbial biomass, activity, and community structure in soil under different tillage and phosphorus management practices. Biol Fertil Soils 49:803–818

    Article  CAS  Google Scholar 

  • Sinsabaugh RL (2010) Phenol oxidase, peroxidase and organic matter dynamics of soil. Soil Biol Biochem 42:391–404

    Article  CAS  Google Scholar 

  • Song C, Han X, Wang E (2011) Phosphorus budget and organic phosphorus fractions in response to long-term applications of chemical fertilisers and pig manure in a Mollisol. Soil Res 49:253–260

    Article  Google Scholar 

  • Sparling G, Whale K, Ramsay A (1985) Quantifying the contribution from the soil microbail biomass to the extractable P levels of fresh and air-dried soils. Aust J Soil Res 23:613–621

    Article  CAS  Google Scholar 

  • Styles D, Coxon C (2006) Laboratory drying of organic-matter rich soils: phosphorus solubility effects, influence of soil characteristics, and consequences for environmental interpretation. Geoderma 136(1–2):120–135

  • Sun D, Bi Q, Xu H, Li K, Liu X, Zhu J, Zhang Q, Jin C, Lu L, Lin X (2017a) Degree of short-term drying before rewetting regulates the bicarbonate-extractable and enzymatically hydrolyzable soil phosphorus fractions. Geoderma 305:136–143

    Article  CAS  Google Scholar 

  • Sun D, Li K, Bi Q, Zhu J, Zhang Q, Jin C, Lu L, Lin X (2017b) Effects of organic amendment on soil aggregation and microbial community composition during drying-rewetting alternation. Sci Total Environ 574:735–743

    Article  CAS  PubMed  Google Scholar 

  • Tabatabai M, Bremner J (1969) Use of p-nitrophenyl phosphate for assay of soil phosphatase activity. Soil Biol Biochem 1:301–307

    Article  CAS  Google Scholar 

  • Thanh Nguyen B, Marschner P (2005) Effect of drying and rewetting on phosphorus transformations in red brown soils with different soil organic matter content. Soil Biol Biochem 37:1573–1576

    Article  Google Scholar 

  • Tiquia SM (2002) Evolution of extracellular enzyme activities during manure composting. J Appl Microbiol 92:764–775

    Article  CAS  PubMed  Google Scholar 

  • Trasar-Cepeda C, Leirós MC, Gil-Sotres F (2008) Hydrolytic enzyme activities in agricultural and forest soils. Some implications for their use as indicators of soil quality. Soil Biol Biochem 40:2146–2155

    Article  CAS  Google Scholar 

  • Turner BL, Cade-Menun BJ, Westermann DT (2003a) Organic phosphorus composition and potential bioavailability in semi-arid arable soils of the western United States. Soil Sci Soc Am J 67:1168–1179

    Article  CAS  Google Scholar 

  • Turner BL, Driessen JP, Haygarth PM, Mckelvie ID (2003b) Potential contribution of lysed bacterial cells to phosphorus solubilisation in two rewetted Australian pasture soils. Soil Biol Biochem 35:187–189

    Article  CAS  Google Scholar 

  • Turner BL, Haygarth PM (2001) Phosphorus solubilization in rewetted soils. Nature 411:258–258

    Article  CAS  PubMed  Google Scholar 

  • Turner BL, Haygarth PM (2003) Changes in bicarbonate-extractable inorganic and organic phosphorus by drying pasture soils. Soil Sci Soc Am J 67:344–350

    Article  CAS  Google Scholar 

  • Valverde A, Burgos A, Fiscella T, Rivas R, Velázquez E, Rodríguez-Barrueco C, Cervantes E, Chamber M, Igual J-M (2006) Differential effects of coinoculations with Pseudomonas jessenii PS06 (a phosphate-solubilizing bacterium) and Mesorhizobium ciceri C-2/2 strains on the growth and seed yield of chickpea under greenhouse and field conditions. Plant Soil 287:43–50

    Article  CAS  Google Scholar 

  • Van Gestel M, Merckx R, Vlassak K (1993) Microbial biomass responses to soil drying and rewetting—the fate of fast-growing and slow-growing microorganisms in soils from different climates. Soil Biol Biochem 25:109–123

    Article  Google Scholar 

  • Van Meeteren MJM, Tietema A, Westerveld JW (2007) Regulation of microbial carbon, nitrogen, and phosphorus transformations by temperature and moisture during decomposition of Calluna vulgaris litter. Biol Fertil Soils 44:103–112

    Article  Google Scholar 

  • Vance ED, Brookes PC, Jenkinson DS (1987) An extraction method for measuring soil microbial biomass-C. Soil Biol Biochem 19:703–707

    Article  CAS  Google Scholar 

  • Vuorinen AH (2000) Effect of the bulking agent on acid and alkaline phosphomonoesterase and β-d-glucosidase activities during manure composting. Bioresour Technol 75:133–138

    Article  CAS  Google Scholar 

  • Xue QY, Shamsi IH, Sun DS, Ostermann A, Zhang QC, Zhang YS, Lin XY (2013) Impact of manure application on forms and quantities of phosphorus in a Chinese Cambisol under different land use. J Soils Sediments 13:837–845

    Article  Google Scholar 

  • Yang J, Li Z, Liang Y, Zhang L, Li W (2009) Effects and their mechanisms of temperature and moisture on phosphorous transformation in black soil manured with different fertilizers. Plant Nutr Fert Sci:1295-1302 (in Chinese with English Abstract)

  • Yevdokimov I, Larionova A, Blagodatskaya E (2016) Microbial immobilisation of phosphorus in soils exposed to drying-rewetting and freeze-thawing cycles. Biol Fertil Soils 52:685–696

    Article  CAS  Google Scholar 

  • Zak DR, Pregitzer KS, Curtis PS, Holmes WE (2000) Atmospheric CO2 and the composition and function of soil microbial communities. Ecol Appl 10:47–59

    Google Scholar 

  • Zhong WH, Cai ZC (2007) Long-term effects of inorganic fertilizers on microbial biomass and community functional diversity in a paddy soil derived from quaternary red clay. Appl Soil Ecol 36:84–91

    Article  Google Scholar 

Download references

Funding

This study was supported by the Natural Science Foundation of China (41571130061), Strategic Priority Research Program of the Chinese Academy of Sciences (B) (XDB15020402), and the National Basic Research Program (973 Program) of China (2013CB127403).

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Xianyong Lin.

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Sun, D., Bi, Q., Li, K. et al. Significance of temperature and water availability for soil phosphorus transformation and microbial community composition as affected by fertilizer sources. Biol Fertil Soils 54, 229–241 (2018). https://doi.org/10.1007/s00374-017-1252-7

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00374-017-1252-7

Keywords

Navigation