萝卜乙烯合成途径基因的鉴定及对胁迫的响应
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国家自然科学基金(31801858);


Identification of Genes Involved in Ethylene Biosynthesis in Radish and Its Response to Biotic and Abiotic Stress
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    摘要:

    该研究通过生物信息学方法,对萝卜(Raphanus sativus L.)乙烯合成途径关键结构基因(MATACSACO)家族成员进行鉴定,并利用转录组数据和荧光定量方法探究其组织表达和对生物及非生物胁迫的响应。结果表明:(1)萝卜基因组中包含8个MAT、16个ACS和7个ACO基因,均可分为3个亚家族。(2)这些基因启动子中至少含有1个光响应顺式作用元件;除ACO1.1和ACO3外,其余基因启动子中均至少含有一种响应植物激素的顺式作用元件;多个基因启动子中含有响应生物及非生物胁迫的顺式作用元件。(3)转录组数据分析发现,萝卜所有MATACS6.1和ACO2/3/4在叶片中均具较高的表达量;根癌农杆菌侵染诱导抗病萝卜的MAT24、ACS2/7.1/7.2和ACO1.1/1.2/4显著上调表达,而感病材料多个基因下调表达;铅、镉和铬胁迫均显著促进MAT4.2和ACO1.1/4的表达,但抑制MAT1和ACO5.1的表达;4 ℃低温显著抑制MAT2.1/2.2/4.1和ACO1.1/5.2的表达。(4)qRTPCR分析表明,NaCl和PEG6000均显著促进ACO5.1/5.2的表达,但抑制MAT4.1和ACO4的表达;果糖和蔗糖可能参与了萝卜对PEG6000胁迫的响应。该结果为研究萝卜乙烯合成途径基因家族成员的功能奠定了基础。

    Abstract:

    In this study, family genes of ethylene biosynthesis (MAT, ACS and ACO) pathway in radish (Raphanus sativus L.) were genomewide identified by bioinformatics method and its tissuespecific response to biotic and abiotic stress were analyzed based on transcriptome data and quantitative realtime PCR. The results showed that: (1) a total of 8 MAT, 16 ACS and 7 ACO candidate genes were identified in radish genome and each family could be further divided into three subgroups. (2) The promoter region harbored at least one cisacting element that function in light responsiveness, and cisacting element involved in the phytohormones responsiveness were also found except for ACO1.1 and ACO3. The promoter region of some genes contains cisacting elements involved in response to biotic and abiotic stresses. (3) The analysis of transcriptome data showed that all MAT genes, ACS6.1 and ACO2/3/4 of radish have high expression levels in leaves. Agrobacterium tumefaciens infection significantly upregulated MAT24, ACS2/7.1/7.2 and ACO1.1/1.2/4 in resistance radish inbred lines, while most of them downregulated in susceptible material. The cadmium, chromium and lead stress significantly induced the expression of MAT4.2 and ACO1.1/4, while reduced the expression of MAT1 and ACO5.1. The expression of MAT2.1/2.2/4.1 and ACO1.1/5.2 were significantly suppressed by chilling stress of 4 ℃. (4) qRTPCR results indicated that both NaCl and PEG6000 stress significantly induced the expression of ACO5.1/5.2, but suppressed MAT4.1 and ACO4. Besides, exogenous fructose and sucrose may be involved in the response of radish to PEG6000 stress. Our findings in the present study will be helpful for the functional research of the ethylene biosynthesis genes in radish.

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刘同金,徐铭婕,崔群香,等.萝卜乙烯合成途径基因的鉴定及对胁迫的响应[J].西北植物学报,2022,42(4):558-568

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  • 在线发布日期: 2022-05-18
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