<p>PLoT-ME: pre-classification of long reads for memory efficient taxonomic assignment</p>

Sylvain Riondet; Kresimir  Križanović; Josip  Marić; Mile Šikić; Niranjan Nagarajan

doi:10.7490/f1000research.1118239.1

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Riondet S, Križanović K, Marić J et al. PLoT-ME: pre-classification of long reads for memory efficient taxonomic assignment [version 1; not peer reviewed]. F1000Research 2020, 9(ISCB Comm J):974 (poster) (https://doi.org/10.7490/f1000research.1118239.1)

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PLoT-ME: pre-classification of long reads for memory efficient taxonomic assignment

Sylvain Riondet¹, Kresimir Križanović, Josip Marić, Mile Šikić, Niranjan Nagarajan

Published 11 Aug 2020 (https://doi.org/10.7490/f1000research.1118239.1)

Author Affiliations

¹ Genome Institute of Singapore, Singapore

Copyright © 2020 Riondet S et al. This is an open access work distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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CITE

Published 11 Aug 2020

PLoT-ME: pre-classification of long reads for memory efficient taxonomic assignment
[version 1; not peer reviewed]

Sylvain Riondet¹, Kresimir Križanović, Josip Marić, Mile Šikić, Niranjan Nagarajan

Author Affiliations

¹ Genome Institute of Singapore, Singapore

Presented at

28th International Conference on Intelligent Systems for Molecular Biology (ISMB) 2020

Abstract

Competing Interests

No competing interests were disclosed

Keywords

long-reads, sequencing, metagenomics, taxonomic, classification, classifier, pre-classification, memory, efficiency

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