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The assembly draft genome sequences of three rockfish species and filtered SNP matrix

Version 4 2019-05-08, 11:34
Version 3 2018-12-26, 07:48
Version 2 2018-12-11, 06:43
Version 1 2018-12-06, 05:25
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posted on 2019-05-08, 11:34 authored by Shengyong XuShengyong Xu, Linlin Zhao, Tianxiang Gao
The draft genome sequences of three species of Sebastes were assembed by using SOAPdenovo2 software. Among the three config files, DES03051-V.41.yu.scafSeq represents the assembly of Sebastes koreanus, with DES03052-V.41.yu.scafSeq representing S. nudus and DES03053-V.41.yu.scafSeq representing S. schlegelii. The VCF file contains filtered SNP loci based on reported Sebastes genome data. The VCF file was produced by using BWA and SAMtools softwares. The phylogenetic neighbor-joining tree file (.nwk) was produced using TASSEL5 software.

Funding

National Natural Science Foundation of China 41776171

National Natural Science Foundation of China 41176117

National Natural Science Foundation of China 31172447

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