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GENESIS - the GENEric SImulation System for modelling state transitions.
Version 7 2018-04-17, 11:21
Version 6 2018-04-10, 13:56
Version 5 2017-09-04, 11:17
Version 4 2017-08-18, 10:40
Version 3 2017-08-01, 15:26
Version 2 2017-06-27, 14:01
Version 1 2017-05-18, 11:22
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posted on 2018-04-17, 11:21 authored by Matthew GillmanMatthew GillmanThis software is a highly-configurable way of modelling transitions between states, given known transition probabilities. It could therefore be used to model a disease progression and/or recovery in a population, or maybe an environmental process. A test suite is included.
You can have multiple branching and also bi-directional transitions.
Full instructions are given in the README.txt file. You will need to have Perl installed, and a C++ 11 compiler. This software has been tested on both Windows and Linux.
You need to have a “state transition table” called stt.txt, and an example is provided. You also need a configuration file config.txt, which sets the initial parameters for the program, and again an example is provided.