These are supplementary tables 1-3; Data used for Fig 5 and reads to generate Fig 5 for this paper
"Systematic and scalable genome-wide essentiality mapping to identify non-essential genes in phages"
Denish Piya1, Nicholas Nolan2, Madeline L. Moore3, Luis A. Ramirez Hernandez3, Brady F. Cress1,4, Ry Young5, Adam P. Arkin1, 2, 3*, Vivek K. Mutalik1, 3*
Innovative Genomics Institute, University of California-Berkeley, Berkeley, CA, USA
Department of Bioengineering, University of California-Berkeley, Berkeley, CA, USA
Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA
Department of Molecular and Cell Biology, University of California-Berkeley, Berkeley, CA, USA
Department of Biochemistry and Biophysics, Center for Phage Technology, Texas A&M University, College Station TX, USA
*Corresponding authors
vkmutalik@lbl.gov (VKM);
aparkin@lbl.gov (APA)
Funding
This work was funded by ENIGMA, a Scientific Focus Area Program supported by the U.S. Department of Energy, Office of Science, Office of Biological and Environmental Research, Genomics: GTL Foundational Science through contract DE-AC02-05CH11231 between Lawrence Berkeley National Laboratory and the U.S. Department of Energy. Phage P1 assay part of this research was supported by the DOE Office of Science through the National Virtual Biotechnology Laboratory, a consortium of DOE national laboratories focused on response to COVID-19, with funding provided by the Coronavirus CARES Act and the early design part of this project was funded by the Microbiology Program of the Innovative Genomics Institute, Berkeley (to A.P.A, and V.K.M.). R.F.Y acknowledges funding from NIGMS grant R35GM136396.