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HCC01 and HCC03 Stereo-seq Data

Version 2 2023-10-02, 04:23
Version 1 2023-09-23, 05:04
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posted on 2023-10-02, 04:23 authored by Ziyi LiZiyi Li

 We profiled two HCC tumor tissues (HCC01 and HCC03) using a new DNA nanoball (DNB)-based spatial transcriptomics technology named Stereo-seq, and segmented the data into 100 * 100 DNB bins (bin 100 resolution, ~50μm diameter).  After basic quality control and filtering, we retrieved transcriptomic information from 36,776 and 23,941 bins from HCC01 and HCC03 tumors respectively, with ~4,000 genes and ~14,500 unique molecular identifiers (UMIs) per bin.

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