Additional file 3 of A high-resolution single-molecule sequencing-based Arabidopsis transcriptome using novel methods of Iso-seq analysis

Zhang, Runxuan; Kuo, Richard; Coulter, Max; Calixto, Cristiane P. G.; Entizne, Juan Carlos; Guo, Wenbin; Marquez, Yamile; Milne, Linda; Riegler, Stefan; Matsui, Akihiro; Tanaka, Maho; Harvey, Sarah; Gao, Yubang; Wießner-Kroh, Theresa; Paniagua, Alejandro; Crespi, Martin; Denby, Katherine; Hur, Asa ben; Huq, Enamul; Jantsch, Michael; Jarmolowski, Artur; Koester, Tino; Laubinger, Sascha; Li, Qingshun Quinn; Gu, Lianfeng; Seki, Motoaki; Staiger, Dorothee; Sunkar, Ramanjulu; Szweykowska-Kulinska, Zofia; Tu, Shih-Long; Wachter, Andreas; Waugh, Robbie; Xiong, Liming; Zhang, Xiao-Ning; Conesa, Ana; Reddy, Anireddy S. N.; Barta, Andrea; Kalyna, Maria; Brown, John W. S.

doi:10.6084/m9.figshare.20267305.v1

13059_2022_2711_MOESM3_ESM.docx (111.82 kB)

Additional file 3 of A high-resolution single-molecule sequencing-based Arabidopsis transcriptome using novel methods of Iso-seq analysis

journal contribution

posted on 2022-07-08, 07:22 authored by Runxuan Zhang, Richard Kuo, Max Coulter, Cristiane P. G. Calixto, Juan Carlos Entizne, Wenbin Guo, Yamile Marquez, Linda Milne, Stefan Riegler, Akihiro Matsui, Maho Tanaka, Sarah Harvey, Yubang Gao, Theresa Wießner-Kroh, Alejandro Paniagua, Martin Crespi, Katherine Denby, Asa ben Hur, Enamul Huq, Michael Jantsch, Artur Jarmolowski, Tino Koester, Sascha Laubinger, Qingshun Quinn Li, Lianfeng Gu, Motoaki Seki, Dorothee Staiger, Ramanjulu Sunkar, Zofia Szweykowska-Kulinska, Shih-Long Tu, Andreas Wachter, Robbie Waugh, Liming Xiong, Xiao-Ning Zhang, Ana Conesa, Anireddy S. N. Reddy, Andrea Barta, Maria Kalyna, John W. S. Brown

Additional file 3: Figure S18. Comparison of AtIso transcripts and SJs to Araport and AtRTD2.

Funding

Biotechnology and Biological Sciences Research Council Rural and Environment Science and Analytical Services Division National Institutes of Health University of York Austrian Science Fund Agence Nationale de la Recherche Japan science and technology Agency National Science Foundation DOE Office of Science, Office of Biological and Environmental Research Deutsche Forschungsgemeinschaft Research Grants Council, University Grants Committee

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Arabidopsis Iso-seq Reference transcript dataset Splice junction Transcription start and end sites Alternative splicing Alternative polyadenylation

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Additional file 3 of A high-resolution single-molecule sequencing-based Arabidopsis transcriptome using novel methods of Iso-seq analysis

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