12711_2021_680_MOESM3_ESM.pdf (261.62 kB)
Additional file 3 of Estimates of recent and historical effective population size in turbot, seabream, seabass and carp selective breeding programmes
journal contribution
posted on 2021-11-07, 04:16 authored by María Saura, Armando Caballero, Enrique Santiago, Almudena Fernández, Elisabeth Morales-González, Jesús Fernández, Santiago Cabaleiro, Adrián Millán, Paulino Martínez, Christos Palaiokostas, Martin Kocour, Muhammad L. Aslam, Ross D. Houston, Martin Prchal, Luca Bargelloni, Kostas Tzokas, Pierrick Haffray, Jean-Sebastien Bruant, Beatriz VillanuevaAdditional file 3. Estimates of Ne (logarithmic scale) obtained by computer simulations with the LD methods of Hayes et al. [5] and Santiago et al. [6], using the software SLiM3 [48].
Funding
Seventh Framework Programme Horizon 2020 Ministerio de Ciencia e Innovación (ES) Xunta de Galicia (ES) Fondos Feder Ministry of Education, Youth and Sports (CZ) Excellence in Research (INUGA) Programme from the Regional Council of Culture, Education and Universities (ES) European Union ERDF Operational Programme Galicia 2014-2020 MCIN/ AEI /10.13039/501100011033
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single nucleotide polymorphismsrecently made availablenine generations agolinkage disequilibrium spectrumfast genetic gainsselective breeding programmesused genomic informationobtain accurate estimatesfarmed populations analysedmanage genetic variabilityselection programmes starteffective population sizebreeding programmesgenetic variabilitypopulation sizeeffective sizegenetic distancesgenetic compositionwhole rangethus accountstherefore leadssnps ),potential fluctuationsnovel methodmethods restrictionmeasures designedlast decadeshigh fecundityfindings highlightestimate currentdicentrarchus labraxcyprinus carpiocommon carpcommercial populationsbase populationsassociated reductions
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