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12866_2016_850_MOESM3_ESM.xlsx (49.78 kB)

Additional file 3: Table S2. of Crystal structure and DNA binding activity of a PadR family transcription regulator from hypervirulent Clostridium difficile R20291

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posted on 2016-10-04, 05:00 authored by Catherine Isom, Smita Menon, Leonard Thomas, Ann West, George Richter-Addo, Elizabeth Karr
List of GLAM2Scan [24] results for scan of the Clostridium difficile R20291 genome for cdPadR1 motif (Fig. 5a). The.xlsx file includes the locus ID for the gene(s) nearest the motif (column A); the gene annotation, if applicable, or the indication that this motif is within an open reading frame (ORF) or between two convergent genes (column B); the genomic placement (start, column C and end, column D); indication of whether the motif is on the leading (+) or lagging (-) strand (column E); the motif sequence generated by GLAM2Scan (column F); and the score generated by GLAM2Scan that indicates how well the sequence fits the cdPadR1 motif (column G). (XLSX 49 kb)

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