raw data and results for Juglandaceae manuscript

Version 2 2023-10-07, 06:59

Version 1 2023-01-15, 05:38

dataset

posted on 2023-10-07, 06:59 authored by Yamei DingYamei Ding

01.genome_assembly: Chromosome-level genomes of Rhoiptelea chiliantha and Engelhardia roxburghiana;

02.MCscanX: Collinearity result of seven species of Jugandaceae.

03.share_WGD: The phylogenetic trees of three types of gene families.

04.Fractionation: Fractionation pattern on the dominant and recessive subgenome of seven species of Jugladaceae using Quercus lobata as the target genome.

05.DNArepair_annotation: DNA repair and recombination gene annotation for seven species of Juglandaceae.

06.Phylogeny: Genome-structural data to infer a phylogeny.

07.GRAMPA: GRAMPA input file and output result.

08.PSMC: PSMC results for seven species of Juglandaceae.

09.HiC-clean data: Hi-C sequencing reads for Rhoiptelea chiliantha

Funding

National Key R&D Program of China (2017YFA0605104), the National Natural Science Foundation of China (41671040 and 31421063), the “111” Program of Introducing Talents of Discipline to Universities (B13008), and Beijing Advanced Innovation Program for Land Surface Processes.

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Keywords

genome datasets Juglandaceae

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CC BY 4.0

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