PXD004989

PXD004989 is an original dataset announced via ProteomeXchange.

Title	PROTOTYPE OF THE CIRCULATING ACELLULAR PROTEOME OF HEALTHY SHEEP USING SERUM
Description	This project deals with the characterisation and establishment of the baseline circulating acellular proteome of sheep serum using generic methods. Serum is a readily available substrate for most experimental and clinical applications as evidenced in recent sheep studies. It involves sample preparation for the optimisation of proteomic profiling of sheep serum. The chapter therefore represents the first step in the development of a proteomics pipeline for the detection protein alterations by first establishing the normal proteomic profile of sheep serum.
HostingRepository	PRIDE
AnnounceDate	2017-06-19
AnnouncementXML	Submission_2017-06-19_02:05:40.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD004989
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Saul Chemonges
SpeciesList	scientific name: Ovis aries (Sheep); NCBI TaxID: 9940;
ModificationList	Gln->pyro-Glu: -17.026549; Glu->pyro-Glu: -18.010565; Oxidation: 15.994915; Deamidated: 0.984016
Instrument	TripleTOF 5600

Revision	Datetime	Status	ChangeLog Entry
0	2016-09-16 05:20:41	ID requested
⏵ 1	2017-06-19 02:05:42	announced

Chemonges S, Tung JP, Fraser JF, Proteogenomics of selective susceptibility to endotoxin using circulating acute phase biomarkers and bioassay development in sheep: a review. Proteome Sci, 12(1):12(2014) [pubmed]

Chemonges S, Gupta R, Mills PC, Kopp SR, Sadowski P, Characterisation of the circulating acellular proteome of healthy sheep using LC-MS/MS-based proteomics analysis of serum. Proteome Sci, 15():11(2016) [pubmed]

curator keyword: Technical, Biological

submitter keyword: Sheep, Serum, Circulating Acellular Proteome, nanoLC-nanoESI-MS/MS

Dr Pawel Sadowski
contact affiliation	Research Officer|Proteomics and Small Molecule Mass Spectrometry Laboratory | Central Analytical Research Facility (CARF)| Queensland University of Technology | Address: Level 6, P Block, Gardens Point Campus, 2 George St Brisbane QLD 4000
contact email	pawel.sadowski@qut.edu.au
lab head
Saul Chemonges
contact affiliation	School of Veterinary Science, The University of Queensland, Australia
contact email	s_chemonges@yahoo.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2017/06/PXD004989

PRIDE project URI

• PRIDE
  1. PXD004989
     1. Label: PRIDE project
     2. Name: PROTOTYPE OF THE CIRCULATING ACELLULAR PROTEOME OF HEALTHY SHEEP USING SERUM