Neutrophil Gelatinase Associated Lipocalin : Structure , Function and Role in Human Pathogenesis

Glycoproteins have a unique position in the pathogenesis of human diseases. Most of the commonly employed protein biomarkers are glycoproteins. Examples include CA19-9 (carbohydrate antigen 19-9) to follow-up patients with pancreatic cancer, CEA (carcinoembryonic antigen) for multiple solid tumors and CA125 (carbohydrate antigen 125) used in the diagnosis, follow-up and therapy of patients with ovarian cancer. Most of these glycoproteins are large molecules. However, there is a family of smaller, secreted glycoproteins (called lipocalins) that are important in the maintenance of health and in combating diseases effectively. A prototype of this family is a small, secreted glycoprotein called Neutrophil gelatinase associated lipocalin or NGAL. In recent years, NGAL has emerged as a novel biomarker in several benign and malignant diseases. Further, studies in cultured cells and in murine models have revealed a pivotal role for this molecule in several physiological processes and pathological conditions. In this Chapter, we review the biology of lipocalins, focusing specifically on NGAL and its role in human health and disease.


Introduction
Glycoproteins have a unique position in the pathogenesis of human diseases.Most of the commonly employed protein biomarkers are glycoproteins.Examples include CA19-9 (carbohydrate antigen 19-9) to follow-up patients with pancreatic cancer, CEA (carcinoembryonic antigen) for multiple solid tumors and CA125 (carbohydrate antigen 125) used in the diagnosis, follow-up and therapy of patients with ovarian cancer.Most of these glycoproteins are large molecules.However, there is a family of smaller, secreted glycoproteins (called lipocalins) that are important in the maintenance of health and in combating diseases effectively.A prototype of this family is a small, secreted glycoprotein called Neutrophil gelatinase associated lipocalin or NGAL.In recent years, NGAL has emerged as a novel biomarker in several benign and malignant diseases.Further, studies in cultured cells and in murine models have revealed a pivotal role for this molecule in several physiological processes and pathological conditions.In this Chapter, we review the biology of lipocalins, focusing specifically on NGAL and its role in human health and disease.

The lipocalin family
Lipocalins are a family of small (160-180 amino acids long) secreted proteins that mediate (among other functions) a common functional role-i.e., transportation of small hydrophobic ligands.Most protein families are classified on the basis of similarity in amino acid sequences, domain architecture and three-dimensional protein structure.The lipocalins however are a unique exception in that the percentage of sequence identity among different members of the lipocalin family is sometimes even lower than the minimum (20%) identity required to call it a reliable alignment (Flower et al., 2000;Flower, 1996;Flower, 1995;Flower, 1994).Despite this lack of a sequence similarity, the lipocalins share three short stretches of amino acid sequences (or motifs) that are part of the structural conservation among different lipocalin sequences.These motifs, which are aptly termed as "structurally conserved regions or SCRs" are used to classify this large family into two main sub-families-Table 1. List of known Kernel and Outlier Lipocalin proteins The secondary and tertiary structure of the lipocalin family members is very similar and is characterized by the presence of a "lipocalin fold"-a symmetrical structure comprised almost entirely of -pleated sheets closed at the two ends by two helices (Figure 1).There are eight antiparallel sheets linked to each other by seven short loops.The N-terminal region of the protein forms the ligand binding cavity which is closed by a conserved 3 10 helix.The cup-shaped cavity of the lipocalins enclosed within the -pleated sheets is well adapted for binding to a wide array of hydrophobic ligands-for instance, while retinol binding protein (RBP) binds primarily to its endogenous ligand retinol, it can also bind to several other hydrophobic ligands including -ionone, -carotene, cholesterol, terpenoids and long chain esters of retinol and retinoic acid.Many lipocalins have also been shown to bind to specific receptors including RBP, alpha1microglobulin, major urinary protein (MUP) and Odorant-binding protein (OBP).A third property of lipocalins is their tendency to form complexes with soluble macromolecules.Some of the well-known protein-protein complexes involving the lipocalin family members include the complex of RBP with transthyretin, NGAL with human neutrophil gelatinase, C8 with C8 as part of the membrane attack complex (MAC) and 1-microglobulin (A1M) with immunoglobulin A (IgA).These associations may either serve to transport proteins (RBP), stabilize the interactor (NGAL), protect normal cells from damage (C8 ) or alter the biological activity of the interacting protein (A1M).Fig. 1.Schematic representation of the lipocalin fold.The characteristic feature of lipocalins is the "lipocalin fold" which comprises of an N-terminal 3-10 helix followed by eight beta sheets (A-I) arranged in an antiparallel orientation.The eighth beta sheet is connected to an alpha helix (denoted as 1), which is in turn connected to a C-terminal beta sheet.The beta sheets are connected by loops (L1-L7).Loops L1,L3,L5 and L7 form the open end of the molecule (i.e. the opening to the ligand binding site of NGAL).The portion of the lipocalin fold that are structurally conserved between different lipocalins is indicated by the blue boxed regions while the region that shows significant conservation in amino acid sequence is indicated by the black boxed region.
Functionally, the lipocalins are generally well known as transport proteins that exist in the extracellular space.The prototypical lipocalin involved in transport of cargo in the body is RBP which binds to and transports retinol (Vitamin A) from the liver to various organs.Binding to RBP not only protects retinol from being excreted by the kidneys but also from being oxidized within the body.Further, it also permits the transport of a relatively insoluble retinol in the form of a soluble complex to the tissues to mediate its effects.Other functions attributed to lipocalins including regulation of cell ageing, survival and differentiation (probasin and purpurin), modulation of immune response (NGAL, AGP, PP14 and AIM), prostaglandin synthesis (glutathione-independent PGD2 synthase), coloration (insecticyanin, BBP and crusticyanin), smell (OBP), taste (VEGP) and as sex hormones or pheromones (MUP and Aphrodisin) (Flower et al., 2000;Flower, 1996;Flower, 1995;Flower, 1994).We will examine the role of a member of the lipocalin family (NGAL) that has been extensively studied particularly as a potential marker for diagnosis and prognosis in several human diseases.We will investigate its biology, functions and clinical applications both in benign and malignant diseases.

Neutrophil gelatinase associated lipocalin (NGAL)-genomic organization and protein structure
Neutrophil gelatinase associated lipocalin (NGAL) also known as migration stimulating factor inhibitor (MSFI), human neutrophil lipocalin (HNL), alpha-1 microglobulin related protein, siderocalin or uterocalin is a 198 amino acid glycoprotein encoded by a gene located on the chromosome locus 3p11.It was first isolated from mouse kidney cells infected with a simian virus (SV-40) (Hraba-Renevey et al., 1989).Triebel and colleagues identified a novel association between NGAL and the gelatinolytic enzyme MMP-9 (matrix metalloproteinase 9 or gelatinase B) known to degrade several components of the basement membrane including type I gelatin and collagen types I, IV, V and XI (Triebel et al., 1992).Human NGAL protein (or LCN2) is represented in upper case, while the murine and rat homologues are usually represented in lower case (Ngal or Lcn2).Structurally, human NGAL contains a 20-amino acid signal peptide at the N-terminal end of the protein followed by the "lipocalin" domain.This domain which is responsible for binding of lipocalins to their ligands, is structurally comprised of an eight stranded barrel with its loops running in an antiparallel direction.A comparison of the amino acid sequence between NGAL homologues in different species reveals that human NGAL is highly similar to the homologue present in chimpanzees (98% identity) but shows much less identity to the mouse and rat homologues (62% and 63% identity respectively).Despite the limited identity of their amino acid sequences, the mouse and human homologue are remarkably similar in their domain architecture (Figure 2) and three-dimensional structure.This feature, i.e. marked structural identity in the absence of significant sequence identity is a common feature of the lipocalin-family of proteins and underlies the conserved function of the lipocalin domain.Studies carried out on mouse Ngal (also called mLcn2) have revealed that it can bind hydrophobic ligands like retinol, cholesterol oleate and oleic acid (Chu et al., 1998).NMR (nuclear magnetic resonance) studies have revealed that the NGAL molecule contains eight antiparallel strands that form a barrel shaped structure (Coles et al., 1999).Three bulges present in this barrel (one formed by the 1st and two by the 6th strand) have been suggested to contribute to the ligand binding site of NGAL.Hydrophobic residues (Tryptophan, Valine and Phenylalanine) present at the base of this barrel-like structure have been shown to be involved in direct binding to the ligand.A patch of positively charged amino acid residues (Lysine and Arginine) present near the mouth of the barrel and projecting into the open end of the molecule has also been suggested to be also important in binding to ligands.Further, a negatively charged "pit" present at the base of the barrel formed by the amino acids Aspartate and Glutamate and a nearby unpaired Cysteine residue have been suggested to be crucial for binding of NGAL to the gelatinase MMP-9.Based on whether NGAL is free or bound to a ligand, it is termed as "apo" or "holo" NGAL respectively.The conformational change between these two forms of the protein is affected by a conformation change occurring at the open end of the NGAL protein.All NGAL homologues (with the exception of the horse and wild hog) contain an Nterminal signal peptide which is cleaved prior to secretion of the protein.This is followed by the lipocalin domain (IPR000566 Lipocln_cytosolic_FA-bd) which makes up most of the length of the protein.This domain which has the consensus sequence is characteristic of proteins belonging to the lipocalin family.Structurally, the lipocalin domain is an eight stranded antiparallel beta barrel enclosing a ligand binding site which can bind to small hydrophobic molecules (e.g.steroids, retinoids, bilins and lipids).The rabbit and horse NGAL proteins also contain a second domain called the "lipocalin-2" domain (Accession number: IPR013208 Lipocalin_2).This domain is present in a small number of proteins (calycin, apolipoprotein D and Lipocalin 2) and is believed to be involved in the transport of hydrophobic ligands (Source: http://www.ebi.ac.uk/interpro/).
Recent data on the ligand binding pocket of NGAL has revealed that it is significantly larger and more polar than a similar pocket in other lipocalin proteins (Goetz et al., 2000).This has led to the speculation that NGAL may bind to large, macromolecular and relatively less hydrophobic ligands including mammalian proteins.However, the identity of one or more of these mammalian ligands for NGAL remains to be elucidated.However, NGAL has been shown to bind to bacterial proteins.Specifically, it binds to iron-chelating proteins released by both gram negative bacteria (i.e.enterobacteria) and mycobacteria (e.g.Mycobacterium tuberculosis) (Nairz et al., 2009;Holmes et al., 2005).These proteins, termed as enterochelin and carboxymycobactin (CMB) respectively have been shown to bind to the ligand binding cavity of NGAL.The latter (i.e.CMBs) however, forms a better fit into the ligand binding pocket of NGAL.This has been in part attributed to the larger number of hydrophobic residues in CMBs which permits the formation of a larger number of hydrogen bonds and Van Der Walls interactions with the ligand binding cavity of NGAL.

Expression of NGAL in normal tissues
Although first discovered as a component of the late granules of neutrophils, NGAL is also strongly expressed in several normal adult human tissues including the non-neoplastic breast ducts, kidney, liver, lungs, trachea, small intestine, bone marrow, thymus, prostate, adipose tissue and macrophages.A weak to no expression of NGAL is observed in the normal pancreas, endometrial glands, and the thymus and peripheral blood leucocytes.NGAL is however completely absent from the normal brain, heart, skeletal muscle, spleen, testes, ovary and colon (Le, V et al., 1997;Seth et al., 2002;Moreno-Navarrete et al., 2010;Cowland et al., 2003;Furutani et al., 1998;Cowland and Borregaard, 1997).Limited studies done in human fetal tissues reveal that NGAL is expressed in trophoblast cells of the placenta, cartilage forming cells (chondrocytes) and in the epithelial cells present in the developing lung and small intestine.NGAL expression has also been reported in the epidermis of the fetal skin beginning around the 20th week of gestation.With increasing age of the fetus, the expression spreads to the lower layers of the skin and becomes progressively concentrated around the hair follicles (Mallbris et al., 2002).

Inflammatory diseases
The expression of NGAL is altered in several benign disease conditions including inflammatory and metabolic disorders.Inflammatory conditions associated with an increase in NGAL expression include pancreatitis, meningitis, myocarditis, psoriasis and periodontitis.Acute pancreatitis (AP) is a reversible, acute inflammation of the pancreas that affects nearly 210,000 patients every year in the United States alone (Banks and Freeman, 2006).While nearly 85% of these patients have a mild form of the illness (termed as mild acute pancreatitis or MAP) and make an uneventful recovery, about 15%-20% of them develop features of severe acute pancreatitis (SAP) (Carroll et al., 2007).SAP is associated with significant morbidity and mortality primarily owing to multi-organ failure (MOF, usually in the first week following onset of disease) and infected pancreatic necrosis (2 weeks or later after onset of disease).We have reported that compared to healthy individuals and those with MAP, plasma NGAL levels are significantly elevated (nearly 15-fold) within 48 hours (of onset of symptoms) in patients with SAP (Chakraborty et al., 2010).The NGAL levels showed a tendency to decline when measured in blood samples collected at later time points (i.e.72 hrs, 96 hrs and 120 hrs).To get a better idea of the time course of the rise in NGAL levels in the blood, we induced either mild or severe acute pancreatitis in mice and followed the change in plasma Ngal levels over time.We found that Ngal levels in mice rose early (within 6 hours following induction of AP) and remained elevated in those with SAP while trending down to levels in control mice (no pancreatitis) and in those with MAP.Meningitis, particularly that caused by gram negative bacteria can cause a systemic inflammatory response syndrome (SIRS) associated with sepsis and significant mortality.A key mediator of this inflammatory response is lipopolysaccharide (LPS), a structural biomolecule present in the outer wall of gram negative bacteria.LPS is a potent stimulator of the immune response and a central player in septic shock in patients with gram negative bacterial infections.Ngal mRNA levels were found to be significantly induced in the choroid plexus (a structure in the ventricles of the brain that produces cerebrospinal fluid) within 12 hours following intraperitoneal injection of LPS while the levels of circulating Ngal (in the cerebrospinal fluid) was strongly induced within 6 hours after injection of LPS (Marques et al., 2008).A significant increase in the level of circulating Ngal was also noted in rats induced to develop features of autoimmune myocarditis by injection of purified porcine myosin (Ding et al., 2010).However, compared to the acute inflammations described earlier, the elevation in Ngal in the rats was significantly delayed, being first evident 9 days following immunization with the foreign protein.A significant increase in NGAL mRNA levels has also been reported in the heart tissues from patients with myocarditis (Ding et al., 2010).Psoriasis, a chronic inflammatory disease of the skin is characterized by the formation of plaques covered by variable amount of scales.NGAL mRNA levels were shown to be significantly upregulated (nearly 10-fold) in the psoriatic lesions (Nomura et al., 2003;Mallbris et al., 2002).Further, NGAL levels were also upregulated in lesions that like psoriasis, exhibited a dysregulation in the process of keratinocyte differentiation (termed as parakeratosis).These diseases include pityriasis rubra pilaris, porokeratosis and chronic (not acute) eczema.Significantly, NGAL expression (from the affected areas of skin) disappeared once the psoriatic lesions had healed with treatment, suggesting that NGAL may play a role in the pathogenesis of diseases with dysregulated epidermal differentiation.NGAL levels were significantly elevated in gum (i.e.alveolar mucosa) tissue from patients affected with localized juvenile periodontitis (LJP), a chronic inflammatory disease of the gums affecting young adults and associated with severe destruction of both soft tissues and bone (Van Dyke et al., 1985).In addition to bacterial infections, NGAL, particularly circulating levels are significantly altered in certain viral infections.For instance, circulating NGAL levels were significantly lower in patients infected with the human immune deficiency virus (HIV) who had not received any therapy (i.e.treatment naïve) compared to non-HIV controls.Significantly, treatment of these patients with the highly active antiretroviral therapy (HAART) was associated with a progressive increase in circulating NGAL levels (Landro et al., 2008).In vitro studies using neutrophils isolated from the three groups of patient revealed that in healthy and HAART-treated HIV positive patients, the neutrophils released NGAL normally into the culture medium.However, in untreated HIV positive patients, this process was defective suggesting that the release of NGAL from neutrophils is inhibited by HIV infection and can be restored following therapy.What proteins of the virus mediate this inhibition, and if there is a prognostic significance of the restoration of NGAL levels following HAART therapy remain unanswered questions.

Metabolic diseases
Metabolic diseases associated with a dysregulation in NGAL expression include obesity, pre-eclampsia and kidney disease.Obesity, defined as a body mass index (BMI) of ≥30kg/m 2 is now recognized to be associated with low grade chronic inflammation and insulin resistance (Pi-Sunyer, 2002).Studies have shown that NGAL levels are significantly elevated in the adipose tissues of both overweight mice and obese human subjects (Wang et al., 2007).Studies in healthy human subjects have revealed that insulin can significantly increase the level of circulating NGAL in the blood (Tan et al., 2009).Similar results have emerged from studies in pregnant women with gestational diabetes who had significantly higher levels of circulating NGAL than those without this complication of pregnancy (D'Anna et al., 2009a).Another pregnancy associated complication associated with a rise in circulating NGAL levels is pre-eclampsia.This condition, characterized by the development of hypertension in or after the 20th week of pregnancy is associated with significant maternal and fetal complications.The elevated levels of NGAL in pre-eclampsia were positively correlated with both systolic and diastolic blood pressure and presence of proteinuria but showed a significant negative correlation with maternal age, pre-pregnancy BMI and weight (D'Anna et al., 2008;D'Anna et al., 2009b).Other conditions where NGAL levels are significantly elevated include atherosclerosis (Anwaar et al., 1998;Elneihoum et al., 1997;te Boekhorst et al., 2011) and hepatitis (Bu et al., 2006).Both hyperlipidemia and chronic alcohol ingestion are associated with significant metabolic perturbations and the aforementioned correlative studies suggest that NGAL has a role to play in the pathogenesis of these diseases.With the development of animal models to study the function of NGAL (discussed later), it is expected that the mechanisms by which NGAL modulates metabolic pathways in health and disease will become better delineated in the near future.The kidney is essential for our survival as it performs the crucial function of maintaining the fluid and mineral balance in our body.This in turn maintains the osmolarity of inter and intracellular fluids crucial for cellular metabolism.Both acute and chronic damage to the kidneys causes metabolic perturbations associated with a significant increase in the expression of NGAL.Chronic kidney disease (CKD) is a disease characterized by a progressive decline in renal function and associated with significant morbidity.Studies in a mouse model that mimics the pathophysiology of CKD in humans revealed that NGAL is the most highly upregulated gene in the kidneys of mice with severe CKD (Viau et al., 2010).It appears that the damaged kidneys synthesize a significantly higher amount of NGAL than usual, particularly in the proximal convoluted tubules (PCT) and the ascending limb of the loop of Henle.NGAL being a secreted protein is then released into the ultrafiltrate and subsequently excreted in urine.The level of Ngal expression in the diseased kidneys correlated positively with the severity of renal lesions (in mice) suggesting that Ngal may promote renal damage in CKD (Viau et al., 2010).A similar observation was also noted in an animal model of autosomal polycystic kidney disease (ADPKD), another cause of CKD in humans (Lau et al., 2000).NGAL levels are elevated in acute kidney injury (AKI) resulting from a wide variety of insults to the kidney ranging from ischemia to toxins.This rise occurs early and depends on both the cause and the extent of renal damage.For instance, following ischemic injury, NGAL levels in the kidney tissue rises by nearly 10-fold within only 3 hours (Mishra et al., 2003).Further, the rise appears to be sustained, being evident for several days following the initial insult.This pattern, an early rise and persistence, makes NGAL a highly sensitive marker of early AKI.Like in CKD, the kidney is the major source of NGAL release in AKI.However, other sources of NGAL that have been suggested include organs that synthesize and release mediators of an acute inflammatory response (e.g. the liver) and immune cells that contain NGAL in their granules (neutrophils and macrophages) (Hvidberg et al., 2005).

Malignant diseases
The expression of NGAL is significantly increased in several solid and hematological tumors and been shown to correlate with both tumor characteristics and disease outcome.Solid tumors that express high levels of NGAL arise in a variety of organs including the digestive (e.g.esophagus, stomach, liver, bile ducts and pancreas), respiratory (lungs), endocrine (thyroid gland and ovaries), reproductive (breast and endometrium) organs and even in the skin.Pancreatic cancer (PC) is the most lethal of all malignant solid tumors in humans (Chakraborty et al., 2011).Several groups including ours have now shown that while NGAL is either completely absent or weakly expressed in the normal pancreatic ducts, a strong expression of NGAL is seen in the malignant cells (Moniaux et al., 2008;Furutani et al., 1998;Tong et al., 2008;Tong et al., 2011).We also observed that the expression of NGAL first appears in pre-malignant lesions (termed as Pancreatic intraepithelial neoplasia or PanINs), with a progressive increase from low to high grade dysplasia.In invasive pancreatic cancer, NGAL expression was significantly higher in well-differentiated PC while poorly differentiated cancer cells showed no expression of the protein (Moniaux et al., 2008).Functional studies to investigate the role of NGAL in PC (discussed later) suggest that it plays a role in the progression of this deadly malignancy.Further, quantitative measurement of NGAL levels in plasma revealed that there was a significant increase in the levels of NGAL in the plasma compared to healthy individuals.These results suggest that NGAL might be potentially useful as a novel biomarker for the diagnosis of PC.Similar to PC, NGAL was weakly expressed by the normal liver cells but strongly expressed in hepatocellular carcinoma (Lee et al., 2011).In gastric cancer however, NGAL expression remains controversial with two groups reporting opposing results-one reporting overexpression and the other a significant downregulation of NGAL in pre-malignant and malignant gastric tissues (Alpizar et al., 2009;Wang et al., 2010).Ngal, the mouse homologue of human NGAL was strongly upregulated in mice that overexpress Insulin like growth factor (IGF-2), a major growth promoting hormone that acts during in utero development.These mice developed lung tumors spontaneously which showed a significant upregulation of Ngal mRNA.Among the endocrine tumors, papillary, follicular and anaplastic thyroid cancers all express NGAL (Iannetti et al., 2008).Notably, the expression of NGAL increases with the loss of tumor differentiation.While NGAL is not detected in the normal ovarian follicles and weakly expressed in benign ovarian tumors, a strong expression of NGAL is noted in borderline and grade 1 (well differentiated) malignant ovarian tumors (Lim et al., 2007).Interestingly, its expression decreased in grade 2 (moderately differentiated) and 3 (poorly differentiated) ovarian cancer (Cho and Kim, 2009).Of the malignancies arising from reproductive organs, ductal carcinoma of the breast and endometrial cancer express high levels of NGAL (Miyamoto et al., 2011;Bauer et al., 2008).
NGAL appears to promote the progression of breast cancer, being higher in actively proliferating cells, in lymph node metastasis and cells positive for the human epidermal growth factor receptor-2 (HER-2/ErbB2).Studies in cell lines suggest that NGAL expression in breast cancer may be regulated by HER-2 (Stoesz and Gould, 1995).In fact, another name for the Ngal protein in rats is Neu-related lipocalin (Neu being the other name for HER-2).Microarray analysis using microdissected normal and malignant endometrial glands revealed that NGAL was strongly upregulated in the malignant endometrial glands .Immunohistochemical analysis of formalin fixed and paraffin embedded tissues also revealed that while the normal endometrium showed a weak expression of NGAL, a strong expression was noted in the areas of endometrial carcinoma (Miyamoto et al., 2011).NGAL is also secreted by the malignant cells in hematological malignancies.Studies done on the murine homolog of NGAL (24p3/Ngal) suggest that in leukemias, particularly those where the cells expresses BCR-ABL, 24p3/Ngal is strongly expressed by the malignant cells (Devireddy et al., 2005;Arlinghaus and Leng, 2008).BCR-ABL is a fusion protein that is found in association with certain leukemias, chiefly chronic myelogenous leukemia (CML) and to a lesser extent in acute lymphoblastic leukemia (ALL) and rarely in acute myelogenous leukemia (AML).This fusion results from a reciprocal translocation event occurring between the long arms of chromosomes 9 and 22.The resultant protein encodes for a protein kinase, specifically a tyrosine kinase that is constitutively active (i.e.does not require any external activation signal).As shown in Figure 3, normal hematopoietic cells (but not the BCR-ABL positive leukemia cells) in mice express the receptor for Ngal (called NgalR or 24p3R).The leukemia cells release large quantities of 24p3/Ngal into the bloodstream which acts via its receptor to induce cell death in the normal hematopoietic cells.Since the leukemic cells do not express the receptor, they remain unaffected.This Fig. 3. Role of NGAL in hematopoietic malignancies: 24p3, the mouse homologue of human NGAL is secreted from BCR-ABL expressing mouse leukemic blast cells, a process that can be blocked using Imatinib, a specific inhibitor of the BCR-ABL tyrosine kinase activity.The 24p3 in the conditioned medium induces apoptosis in normal hematopoietic cells (express the 24p3 receptor or 24p3R) but not in the BCR-ABL+ leukemic cells that are devoid of 24p3R.mechanism has been suggested to be responsible for the spread of leukemia cells through the healthy bone marrow (Hu et al., 2009;Leng et al., 2008;Lin et al., 2005).Further, studies in mice also suggest that while 24p3/Ngal is required for the establishment of BCR-ABL + leukemia cells in the spleen and bone marrow, it is the BCR-ABL but not Ngal was the gene ultimately driving the progression of the disease.Studies in CML patients have confirmed the findings in mice.Both NGAL mRNA and plasma levels are significantly elevated in patients with CML (Leng et al., 2008;Villalva et al., 2008).Further, patients who responded to treatment with Imatinib (a specific inhibitor of BCR-ABL tyrosine kinase) showed a significant decrease in NGAL mRNA (but not in plasma NGAL levels).(Owen et al., 2008)

Functions of NGAL
An important function of NGAL under physiological conditions is to act as bacteriostatic agent, thus protecting the body against both gram negative bacteria and mycobacterial infection.It mediates this function by binding with strong affinity to bacterial iron binding proteins called siderophores.Iron, particularly ferrous form is required by bacteria for their growth.However, the extremely low levels of free iron in the body make it an essential nutrient required by bacterial cells.To circumvent this requirement for iron, bacteria have evolved a mechanism involving the expression of proteins (termed siderophores) that bind to free iron (present in the intestinal fluid and inside macrophages) particularly in its ferric form.NGAL has a strong affinity to bind to siderophores, both when free and when laden with iron.Upon binding to these proteins, the NGAL siderophore complex is taken up by cells expressing the cognate receptor for NGAL and thus these iron laden proteins are sequestered away.In this way, by depriving bacteria of an essential nutrient, NGAL inhibits their proliferation (Nairz et al., 2009;Holmes et al., 2005).The recent discovery that catechols, a family of plant derived metabolites present in our diet, can bind NGAL has opened new possibilities for the functional role of human NGAL in health and disease.Interestingly, while catechols itself bound weakly to NGAL, their binding was significantly enhanced in the presence of iron, specifically ferric iron.More detailed studies have revealed that three catechol molecules form a complex (a triscatecholate complex) with iron acting as a stabilizing agent through formation of pi interactions and electrostatic interactions with the catechol molecules.This ferrictriscatecholate complex then binds to the ligand binding cavity (calyx) of NGAL.In mice, it has been observed that this complex of Ngal and iron-catechol is filtered through the kidneys before being re-absorbed in the proximal convoluted tubules through specific Ngal receptors (Bao et al., 2010;Backhed et al., 2005).However, the function of these complexes alone and in combination with Ngal still remains to be elucidated.Other functions attributed to Ngal include acting as a chemoattractant for neutrophils and as an inhibitor of cellular oxidative stress.The former function is based on observations that mice in which the Ngal gene is knocked out show a significant decrease in the number of neutrophils infiltrating transplanted heart tissue (compared to wild type mice with both copies of the gene intact).This suggests that neutrophils, the primary effectors of acute inflammatory response in the body, require NGAL to home in to the target organs (in this case the transplanted heart).The latter role is suggested from observations made in both Chinese hamster ovary (CHO) and human embryonic kidney (HEK) cells that an aberrant expression of 24p3/Ngal leads to a significant upregulation in the expression of the antioxidant enzymes superoxide dismutase (SOD) and heme oxygenase (HO) (Bahmani et al., 2010;Roudkenar et al., 2007;Roudkenar et al., 2008c;Roudkenar et al., 2008a;Roudkenar et al., 2008b).NGAL also appears to play a role in wound healing.In a study of patients with chronic venous ulcers (CVUs), an analysis of the exudate from the wounds of those with either healing (H) or non-healing (NH) CVUs revealed that the former (H-CVU) group had a significant decline the level of exudate-NGAL levels compared to the latter (NH-CVU) group of patients (Pukstad et al., 2010).NGAL also appears to modulate proliferation and synthesis of cartilage by murine chondrocytes and promotes proliferation of renal tubular epithelial cells (Owen et al., 2008).Apart from healthy cells, NGAL also modulates proliferation and survival of certain types of malignant cells (thyroid cancer and hepatocellular carcinoma).In the former type of cancer cells, NGAL appears to promote proliferation and survival, while it had the opposite effect in hepatocellular carcinoma cells (Iannetti et al., 2008;Lee et al., 2011).In other types of cancer cells (e.g.pancreatic, breast and colon cancer) however, NGAL does not seem to have any effect on proliferation.Instead, it significantly inhibits the ability of these cancer cells to invade and metastasize (Tong et al., 2008;Lee et al., 2006).Two possible mechanisms have been suggested to explain this anti-invasive effect of NGAL.One mechanism involves inhibition of the non-receptor tyrosine kinase FAK (focal adhesion kinase).FAK interacts with Src (another non-receptor tyrosine kinase) and provides a scaffold for activation of the Ras-MAPK (Mitogen activated protein kinase pathway), a key mediator of metastasis in cancer cells.NGAL, by inhibiting FAK would in turn inhibit the Ras-MAPK pathway and thus block both invasion and metastasis of cancer cells.A second mechanism, based on studies by our group, suggests that E-cadherin when ectopically expressed can increase expression of NGAL (Tong et al., 2011).E-cadherin is a calcium dependent cell adhesion molecule that is expressed in and promotes epithelial cells to adhere to one another (thus preventing metastasis).Further, studies by us in human pancreatic cancer cells also suggest that NGAL inhibits angiogenesis (formation of blood vessels) (Tong et al., 2008).A clue to the underlying mechanism comes from observations that conditioned media from pancreatic cells in which endogenous NGAL had been silenced (using short hairpin RNAs) significantly decrease formation of capillary like structures by human vascular endothelial (HUVEC) cells in vitro.This is associated with a significant decrease in the release of vascular endothelial growth factor (VEGF), a key promoter of angiogenesis from the NGAL silenced cells.Knockout of both copies of the murine Ngal homologue (i.e.Ngal -/-mice) did not result in any phenotypic abnormalities in the knockout mice compared to their wild type littermates.However, the Ngal knockout mice were significantly more sensitive to infection with gram negative bacteria, exhibiting a nearly 1000-fold greater bacteremia (upon infection with Escherichia coli, a gram negative enteric pathogen) compared to their wild type littermates.Further investigation revealed that there was no difference in the absolute number of different leukocyte subpopulations between the wild type (Ngal +/+ ) and knockout mice (Ngal -/-) (Flo et al., 2004).As discussed earlier, Ngal is crucial to prevent growth of bacteria, particularly within the macrophages and also for homing of neutrophils to sites of acute inflammation (including bacterial infection).Both these mechanisms would be severely affected in the Ngal knockout mice, thus contributing to the enhanced bacteremia and resulting mortality.These observations suggest that lack of Ngal produces a qualitative rather than a quantitative defect in the immune system that in turn leads to an increased susceptibility to gram negative sepsis.

Regulation of NGAL expression
Given the observation that NGAL is differentially expressed in a wide array of benign and malignant diseases, it is extremely important to investigate the mechanisms that regulate its expression.Most studies have focused on the regulation of transcription of its mRNA.Several cytokines, hormones, vitamins, minerals, synthetic drugs and growth factors have been shown to influence the expression of NGAL (Table 2).Each of these probably acts in a context dependent manner to influence the expression of this glycoprotein.NF-κB , a transcription factor and regulator of several key pathways in the cell has emerged as a front runner in the regulation of NGAL gene expression.The NF-κB family comprises five transcription factors (p50, p52, p65 (or RelA) and c-Rel and RelB).These proteins are related to one another by the presence of the Rel homology domain (RHD), present in the Nterminal region of each member of this family.The C-terminal region contains either a transcription activation domain (TAD, in case of RelA, c-Rel and RelB) or a transcription repression domain (TRD in case of p50 and p52).These proteins form homo or heterodimers with each other through the RHD domain and then bind to short (9-10 bases long) sequence in the promoter or enhancer regions of target genes (termed as kB response elements).RelA, c-Rel and RelB activate gene expression (owing to presence of the TAD) while p50 and p52 inhibit gene expression (through the TRD) unless they associate with another member that has a TAD in its C-terminus.NGAL too has κB elements in its promoter region and has been shown to be positively regulated by agents that induce NF-κB (like insulin, IL-1 and TLRs).Another pathway that has been shown to promote NGAL expression is the JNK (cjun N-terminal kinase) MAPK pathway.Cytokines like IL-1 and IL-17 can both activate the JNK pathway.A cross talk between the JNK and NF-κB has been suggested to act together to upregulate NGAL expression (Florin et al., 2004;Yang et al., 2008;Park et al., 2005).Dexamethasone, a synthetic corticosteroid induces NGAL mRNA expression acting through the glucocorticoid receptor (GRs) and glucocorticoid response elements (GREs) present in the promoter region of NGAL (Garay-Rojas et al., 1996).The epidermal growth factor receptor (EGFR) when activated initiates signaling events that promote cell proliferation, survival and enhance migration and invasiveness of a variety of cancer cells.We have reported that EGF treatment decreases the expression of NGAL mRNA.This was associated with a significant downregulation of the epithelial marker Ecadherin.Mechanistically, EGF mediated downregulation of NGAL expression occurs by inhibition of the NF-κB pathway (Tong et al., 2011).However, the role of EGF in regulating NGAL appears to be dependent on the cell type.For instance, treatment of mouse renal tubular epithelial cells with EGF led to a significant upregulation of Ngal expression.The mechanism of upregulation of Ngal by EGF (in mice renal cells) appears not to be through the NF-κB pathway but rather through stabilization of the transcription factor HIF-1 (hypoxia inducible factor-1 ).Epigenetic mechanisms have been shown to be central to the process of de novo induction or repression of genes.Treatment of endometrial cancer cells that express a low level of NGAL with a demethylating agent 5-aza cytidine led to a significant upregulation of NGAL mRNA.However, the same agent had no effect on cells that had a high basal level of NGAL (Miyamoto et al., 2011).This suggests that methylation may be a mechanism to differentially turn on or off the expression of NGAL in disease states including cancer.

359
These reports taken together suggest that multiple stimuli, acting through a relatively small number of pathways regulate the expression of NGAL.However, many of these studies have been done in vitro and need to be examined in vivo particularly using knockout mouse models.Nonetheless, they shed important light on the complex regulation of this protein and will be important in future attempts to modulate its expression for therapeutic purposes.

Role of NGAL as a diagnostic and prognostic marker
The differential expression of NGAL in disease states has been utilized as a rationale to investigate the potential of NGAL as a biomarker in the diagnosis of these diseases.Among benign diseases, acute kidney injury (AKI) represents the disease where this secreted protein has been most extensively studied for its diagnostic performance.In one study, urine NGAL levels rose significantly within as early as 6 hours following elective cardiac surgery in patients admitted to the intensive care units (ICU) who met the criteria for AKI, suggesting that it is an early marker of renal injury (Koyner et al., 2010).Further, corrected urine NGAL levels (corrected for serum creatinine) when measured at the time of the patient's arrival to the ICU was a good predictor of severe AKI post-cardiac surgery (Area under the curve or AUC being 0.88, 95% CI: 0.73-0.99).Another study found that among post-cardiac surgery patients, plasma NGAL levels rose upto 24 hours prior to patients meeting the current clinical criteria for AKI (i.e. the RIFLE or Risk, Injury, Failure, Loss and End stage renal disease criteria) (Cruz et al., 2010).Further, plasma NGAL was a good predictor of the need for renal replacement therapy (RRT) during the stay of the patients in the ICU (AUC 0.82, 95% CI 0.70-0.95).NGAL is also an early predictor of DGD (delayed graft dysfunction), a type of renal dysfunction in kidney transplant recipients that often develops within a week after transplant and is often severe enough to require dialysis (Korbely et al., 2011;Shapiro et al., 2010).Pre-renal azotemia refers to reversible renal injury which is completely reversible within 24-72 hours if the cause is removed.Distinguishing pre-renal azotemia from AKI is one of the major challenges for nephrologists and critical care physicians today.A comparison of urine NGAL levels between patients with pre-renal azotemia and AKI revealed that urine NGAL levels were significantly higher in patients with AKI (mean±SEM level being 416+387 μg/g of creatinine) compared to those with pre-renal azotemia (mean±SEM being 30+92 μg/g creatinine) (Nickolas et al., 2008).The results were validated in another independent cohort of 107 patients, 32 of whom had pre-renal azotemia (Singer et al., 2011).Diagnosis of AKI in children presents a special challenge.Owing to the incomplete development of their nephrons, they have higher baseline levels of creatinine than adults.Hence, serum creatinine may not be an appropriate marker to detect AKI in these patients.A comparison of NGAL and creatinine in pediatric patients (both neonates and older patients) revealed that urine NGAL levels were elevated within 2 hours following cardiopulmonary bypass (CPB) surgery and remained elevated for even upto 48 hours.Significantly, urine NGAL >185 ng/ml or a plasma NGAL >95 ng/ml was 100% sensitive (88% for plasma) and 93% specific (both urine and plasma) in identifying AKI in neonatal patients.The corresponding cut-off for older children was >45ng/ml (urine) or >48ng/ml (plasma).The corresponding sensitivity and specificity were 85% (90% for plasma) and 86% (88% for plasma) respectively (Krawczeski et al., 2011).Elevation in NGAL, particularly in combination with an elevation in the levels of IL-1 receptor and protein C was the best predictor of the risk of developing severe sepsis among a panel of nine potential markers in a cohort of 506 patients admitted with systemic inflammatory response syndrome (SIRS) (AUC 0.75, 95% CI 0.72-0.78 vs. those who did not develop severe sepsis).This panel of three markers was also fairly accurate in predicting both septic shock (AUC 0.77) and death (AUC 0.79) within 24 hours of hospital admission in critically ill patients (Endre et al., 2011).In addition to its role as a diagnostic marker, NGAL has also emerged as an important prognostic indicator in several diseases.Studies in obese type-2 diabetics revealed that serum NGAL levels were negatively correlated with the levels of total cholesterol, an important determinant of coronary artery disease (CAD).Further, the level of serum NGAL was an independent predictor of insulin resistance and hyperglycemia in these patients.In patients with acute decompensated heart failure (ADHF), serum NGAL levels (at admission) were significantly higher in those patients who had worsening of renal function (WRF) compared to those whose renal function was intact.At a cut-off of ≥140 ng/ml, serum NGAL was 86% sensitive and 54% specific in predicting the development of WRF in these patients (Chertow et al., 1998).NGAL has been widely investigated as a prognostic indicator in AKI from various causes.In patients undergoing cardiovascular surgery, AKI is always a potential complication predominantly due to ischemia during the procedure.Urine NGAL levels have been shown to be fairly accurate (AUC 0.59-0.65) in early identification (within 3 hours) of AKI following CPB surgery (Shapiro et al., 2009).We have demonstrated that an elevated plasma NGAL level among patients with SAP is associated with a significantly poor outcome (i.e.increased risk of death).This effect appears to be specific to SAP as no such correlation was observed in MAP patients.Further, in a small study, NGAL appeared to perform equal or better than other established clinical prognostic indicators in SAP (i.e.serum creatinine, Ranson's score and the APACHE-II score) (Chakraborty et al., 2010).As techniques continue to evolve, it is expected that assays for NGAL will become increasingly sensitive.One study comparing ELISA (enzyme linked immunosorbent assay) with RIA (radioimmunoassay) found that the latter was between 5-10 fold more sensitive than ELISA in detecting a rise in NGAL among patients undergoing cardiac surgery, with the sensitivity being the highest in the first 2 hours (Aghel et al., 2010).NGAL has also emerged as a potential biomarker in several epithelial malignancies.In gastric cancer patients, serum NGAL could distinguish patients with cancer from noncancer patients with an AUC of 0.93 (Wang et al., 2010).NGAL was better than either CA19-9 or CEA (carcinoembryonic antigen) in identifying early gastric cancer (i.e.Stage 1 and 2) patients suggesting that it could be a potential biomarker for early stage gastric cancer.NGAL was also fairly accurate in discriminating between benign and malignant biliary obstruction (AUC 0.76 with a sensitivity and specificity of 96% and 56%) (Klapper et al., 2008).In ovarian cancer however, NGAL was 72% sensitive but only 50% specific in distinguishing ovarian cancer from non-cancer patients.In comparison, CA125 was 80% sensitive and 79% specific in distinguishing between the two groups (Argani et al., 2001).NGAL also appears to correlate with prognosis of cancer patients.For instance, patients whose tumors expressed NGAL had a significantly shorter survival (both disease specific and disease free) compared to those with NGAL non-expressing tumors (12.2 years in NGAL expressing vs. 17.1 years in NGAL non-expressing tumors).Multivariate analysis revealed that NGAL was an independent predictor of disease free survival (hazard ratio 1.85).In gastric cancer too, patients whose tumors expressed NGAL had a significantly www.intechopen.comNeutrophil Gelatinase Associated Lipocalin: Structure, Function and Role in Human Pathogenesis 361 shorter survival compared to tumors whose tumors did not express any NGAL (35.6 .months vs. 54.4months respectively) (Alpizar et al., 2009).

Conclusions
The preceding discussion suggests that NGAL, despite its low molecular weight is an important protein particularly from the standpoint of protecting against bacterial infections.Further, it appears that NGAL has other novel functions in disease states, particularly in epithelial malignancies where it can modulate cell proliferation, cell death, invasion and metastasis of cancer cells.In other diseases, particularly in renal injury, the role of NGAL remains to be elucidated.NGAL expression appears to be regulated by a variety of stimuli through mainly the NF-κB pathway although epigenetic modifications may be important, particularly in initiating its de novo expression during diseases like cancer.NGAL has also emerged as a biomarker with immense clinical potential, both in benign and malignant diseases.Further, while limited studies exist, it also appears to be capable of predicting the outcome of patients with multiple diseases.All these features make NGAL an important diagnostic target.An interesting observation is that the Ngal knockout mice do not exhibit any obvious defects.However, they are extremely sensitive to infection by gram negative bacteria.These results clearly suggest that NGAL may be an important protective agent in gram negative bacterial infections.Further studies using these mice will be crucial to delineate its role in determining sensitivity to other inflammatory and malignant diseases.Taken together, NGAL has emerged as a clinically important member of the lipocalin family and holds immense potential for diagnostic and therapeutic applications in the future.

Acknowledgements
Surinder K Batra, Subhankar Chakraborty and Sukhwinder Kaur are supported in part by grants from the US Department of Defense (BC074631, BC083295 and PC074289) and the NIH (RO1 CA78590, UO1 CA111294, RO1 CA131944, RO1 CA133774, RO1 CA 138791 and P50 CA127297).Sushovan Guha is supported by grants from MDACC McNair Foundation Scholar Award and the Cyrus Scholar Award.The authors have no other relevant affiliations or financial involvement with any organization or entity with a financial interest in or financial conflict with the subject matter or materials discussed in the manuscript apart from those disclosed.No writing assistance was utilized in the production of this manuscript.

Fig. 2 .
Fig. 2. Domain architecture of human NGAL and its homologues.Human NGAL and its homologues are characterized by a high degree of similarity in their domain architecture.All NGAL homologues (with the exception of the horse and wild hog) contain an Nterminal signal peptide which is cleaved prior to secretion of the protein.This is followed by the lipocalin domain (IPR000566 Lipocln_cytosolic_FA-bd) which makes up most of the length of the protein.This domain which has the consensus sequence [DENG] -{A} -[DENQGSTARK] -x(0,2) -[DENQARK] -[LIVFY] -{CP} -G -{C} -W -[FYWLRH] -{D} -[LIVMTA] is characteristic of proteins belonging to the lipocalin family.Structurally, the lipocalin domain is an eight stranded antiparallel beta barrel enclosing a ligand binding site which can bind to small hydrophobic molecules (e.g.steroids, retinoids, bilins and lipids).The rabbit and horse NGAL proteins also contain a second domain called the "lipocalin-2" domain (Accession number: IPR013208 Lipocalin_2).This domain is present in a small number of proteins (calycin, apolipoprotein D and Lipocalin 2) and is believed to be involved in the transport of hydrophobic ligands (Source: http://www.ebi.ac.uk/interpro/).

Table 2 .
Summary of factors regulating NGAL expression