Published September 29, 2023 | Version v3.0.1
Software Open

secsse: Several Examined and Concealed States-Dependent Speciation and Extinction

Creators

  • 1. University of Aberdeen
  • 2. Sovon Dutch Centre for Field Ornithology
  • 3. University of Groningen

Contributors

  • 1. University of Groningen

Description

SecSSE is an R package designed for multistate data sets under a concealed state and speciation (hisse) framework. In this sense, it is parallel to the 'MuSSE' functionality implemented in diversitree, but it accounts for finding possible spurious relationships between traits and diversification rates ('false positives', Rabosky & Goldberg 2015) by testing against a 'hidden trait' (Beaulieu et al. 2013), which is responsible for more variation in diversification rates than the trait being investigated.

Notes

Compiled code (*.cpp and *.h files) is licensed under the BSL-1.0. See file COPYRIGHTS and LICENSE.note for mode details

Files

rsetienne/secsse-v3.0.1.zip

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Additional details

Related works

Is supplement to
https://github.com/rsetienne/secsse/tree/v3.0.1 (URL)