Published December 8, 2022
| Version v0
Dataset
Open
MetaTiME scRNA Data
Description
Tumor scRNAseq Data for MetaTiME.
A large collection of uniformly processed tumor single-cell RNA-seq. Includes raw data and MetaTiME score for the TME cells.
Please also cite MetaTiME (bioRxiv https://doi.org/10.1101/2022.08.05.502989; new journal article doi pending) and TISCH (https://doi.org/10.1093/nar/gkaa1020) if using this data.
MetaTiME GitHub repo for annotating cell states in tumor: https://github.com/yi-zhang/MetaTiME
Files
Files
(48.3 GB)
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Additional details
Related works
- Is published in
- Preprint: 10.1101/2022.08.05.502989 (DOI)
References
- Zhang et al. (2022) MetaTiME: Meta-components of the Tumor Immune Microenvironment. https://doi.org/10.1101/2022.08.05.502989