ktest

This package implements kernel tests such as kFDA and MMD. Contains source code for publication:

Anthony Ozier-Lafontaine, Camille Fourneaux, Ghislain Durif, Polina Arsenteva, Céline Vallot, Olivier Gandrillon, Sandrine Gonin-Giraud, Bertrand Michel, Franck Picard. (2024). Kernel-Based Testing for Single-Cell Differential Analysis. Preprint, 10.48550/arXiv.2307.08509.

The results presented in the paper are available at https://github.com/AnthoOzier/ktest_experiment_genome_biology_2024. The source code for experimental_data and squair scripts are based on the branch "publication_genome_biology" (https://github.com/LMJL-Alea/ktest/tree/publication_genome_biology). The reversion scripts are based on the branch "publication_genome_biology_reversion" (https://github.com/LMJL-Alea/ktest/tree/publication_genome_biology_reversion). See https://github.com/AnthoOzier/ktest_experiment_genome_biology_2024 for more details.