Dataset and Conference Proceeding "Reconstructed (charm) baryon methods at finite temperature on anisotropic lattices"

A set of scripts and folders to reproduce the analysis and plots in the proceedings for the Lattice 2023 Conference "Reconstructed (charm) baryon methods at finite temperature on anisotropic lattices".

This repository includes the raw correlator data, the scripts and software used to analyse them as well as a script which can be run in order to reproduce the analysis, and particularly the figures in the manuscript.

In this folder is the tex documents, the Figures folder and the dataScripts folder where the dataset and scripts are. Inside that folder is:

correlators

Correlators from openqcd-fastsum-hadspec are zipped in the correlators folder. These are unzipped automatically by the run script. The correlators are plain text files.

bin/lib

The python code and scripts that do the analysis. There is some modularity here with the libraries in the lib folder

fits.zip  & fits_gvar.zip

Contains the nucleon fit results. The Xi_cc (ccu) results may be produced using the supplied data of https://arxiv.org/abs/2308.12207

To Run

To run, make and activate the conda environment below, and then do `sh run.sh` in the `dataScripts` folder. This will run the analysis and plots. These will be placed in the same directory as 'run.sh'

Conda Notes

Install your favourite conda solution, such as https://docs.conda.io/en/latest/miniconda.html

Switch to a faster environment solver

This is optional, but likely will solve the dependencies much much faster. See https://www.anaconda.com/blog/a-faster-conda-for-a-growing-community conda update -n base conda conda install -n base conda-libmamba-solver conda config --set solver libmamba

Install Environment

conda env create -f environment.yml

Activate/Use

conda activate trinPD

Update (w. new packages)

1. Edit environment.yml
2. Deactivate conda environment with conda deactivate
3. Update conda environment with conda env update -f=environment.yml