Published March 17, 2022 | Version v0.3.4
Software Open

APT: Animal Part Tracker v0.3.4

  • 1. HHMI Janelia Research Campus
  • 2. Leap Scientific
  • 3. Brown University

Description

APT is a machine-learning based software package that enables tracking the pose or posture of behaving animals in video. APT can work with potentially any animal (or animals), in any setting or experimental configuration. Its major functionality includes:

  • Implementations of a number of leading DNN (deep neural network) architectures for learning and prediction, as well as extensibility to new, user-defined deep networks
  • Support for GPU training and tracking on a local workstation with our Docker image, in the AWS cloud, or with the JRC GPU cluster (for Janelians)
  • A fully-featured graphical interface
  • A rich MATLAB command-line API for scripting and advanced users
  • Support for multi-camera data with 3D-enabled labeling and tracking
  • Support for projects with multiple animals and/or externally-generated body tracking

... and much more!
More information here: http://kristinbranson.github.io/APT/

v0.3.4: Relatively stable version of the develop branch of APT, created 20220317.

Files

kristinbranson/APT-v0.3.4.zip

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