Molecular Dynamics Showcase

By Michael McLennan

Purdue University

View interesting features of a molecular dynamics trajectory file

Launch Tool

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Archive Version 0.4
Published on 09 Jan 2014 All versions

doi:10.4231/D34F1MJ4S cite this

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Abstract

This tool uses VMD as a visualization engine, but provides a simpler view of the interesting features within a molecular dynamics trajectory file. Users can choose from among a handful of views. Each view can take the user to a particular frame within the trajectory, and render that frame from a particular point of view with various options turned on.

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VMD Visual Molecular Dynamics, http://www.ks.uiuc.edu/Research/vmd/

Cite this work

Researchers should cite this work as follows:

  • Michael McLennan (2016), "Molecular Dynamics Showcase," https://nanohub.org/resources/mdshowcase. (DOI: 10.4231/D34F1MJ4S).

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