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Figures S1–S6
Data type: Phylogenetic trees (pdf file)
Explanation note: Figure S1. Phylogenetic tree based on maximum likelihood analysis of act gene region. Bootstrap support values ≥ 80% for maximum parsimony (MP), Ultrafast bootstrap support values ≥ 95% for maximum likelihood (ML), and posterior probability (PP) values ≥ 0.95 from BI analyses are presented at the nodes (MP/ML/PP). Bootstrap values below 80% (MP), 95% (ML) and posterior probabilities below 0.80 are marked with “-”. Ex-type isolates are indicated by “▲”, isolates highlighted in bold were sequenced in this study, and novel species are in blue and orange. C. gracilipes was used as outgroup. The scale bar indicates the number of nucleotide substitutions per site. Figure S2. Phylogenetic tree based on maximum likelihood analysis of cmdA gene region. Bootstrap support values ≥ 80% for maximum parsimony (MP), Ultrafast bootstrap support values ≥ 95% for maximum likelihood (ML), and posterior probability (PP) values ≥ 0.95 from BI analyses are presented at the nodes (MP/ML/PP). Bootstrap values below 80% (MP), 95% (ML) and posterior probabilities below 0.80 are marked with “-”. Ex-type isolates are indicated by “▲”, isolates highlighted in bold were sequenced in this study, and novel species are in blue and orange. C. gracilipes was used as outgroup. The scale bar indicates the number of nucleotide substitutions per site. Figure S3. Phylogenetic tree based on maximum likelihood analysis of his3 gene region. Bootstrap support values ≥ 80% for maximum parsimony (MP), Ultrafast bootstrap support values ≥ 95% for maximum likelihood (ML), and posterior probability (PP) values ≥ 0.95 from BI analyses are presented at the nodes (MP/ML/PP). Bootstrap values below 80% (MP), 95% (ML) and posterior probabilities below 0.80 are marked with “-”. Ex-type isolates are indicated by “▲”, isolates highlighted in bold were sequenced in this study, and novel species are in blue and orange. C. gracilipes was used as outgroup. The scale bar indicates the number of nucleotide substitutions per site. Figure S4. Phylogenetic tree based on maximum likelihood analysis of rpb2 gene region. Bootstrap support values ≥ 80% for maximum parsimony (MP), Ultrafast bootstrap support values ≥ 95% for maximum likelihood (ML), and posterior probability (PP) values ≥ 0.95 from BI analyses are presented at the nodes (MP/ML/PP). Bootstrap values below 80% (MP), 95% (ML) and posterior probabilities below 0.80 are marked with “-”. Ex-type isolates are indicated by “▲”, isolates highlighted in bold were sequenced in this study, and novel species are in blue and orange. C. gracilipes was used as outgroup. The scale bar indicates the number of nucleotide substitutions per site. Figure S5. Phylogenetic tree based on maximum likelihood analysis of tef1 gene region. Bootstrap support values ≥ 80% for maximum parsimony (MP), Ultrafast bootstrap support values ≥ 95% for maximum likelihood (ML), and posterior probability (PP) values ≥ 0.95 from BI analyses are presented at the nodes (MP/ML/PP). Bootstrap values below 80% (MP), 95% (ML) and posterior probabilities below 0.80 are marked with “-”. Ex-type isolates are indicated by “▲”, isolates highlighted in bold were sequenced in this study, and novel species are in blue and orange. C. gracilipes was used as outgroup. The scale bar indicates the number of nucleotide substitutions per site. Figure S6. Phylogenetic tree based on maximum likelihood analysis of tub2 gene region. Bootstrap support values ≥ 80% for maximum parsimony (MP), Ultrafast bootstrap support values ≥ 95% for maximum likelihood (ML), and posterior probability (PP) values ≥ 0.95 from BI analyses are presented at the nodes (MP/ML/PP). Bootstrap values below 80% (MP), 95% (ML) and posterior probabilities below 0.80 are marked with “-”. Ex-type isolates are indicated by “▲”, isolates highlighted in bold were sequenced in this study, and novel species are in blue and orange. C. gracilipes was used as outgroup. The scale bar indicates the number of nucleotide substitutions per site.