Hydroxycinnamyl Derived BODIPY as a Lipophilic Fluorescence Probe for Peroxyl Radicals

Herein, we describe the synthesis of a fluorescent probe NB-2 and its use for the detection of peroxyl radicals. This probe is composed of two receptor segments (4-hydroxycinnamyl moieties) sensitive towards peroxyl radicals that are conjugated with a fluorescent reporter, dipyrrometheneboron difluoride (BODIPY), whose emission changes depend on the oxidation state of the receptors. The measurement of the rate of peroxidation of methyl linoleate in a micellar system in the presence of 1.0 µM NB-2 confirmed its ability to trap lipid peroxyl radicals with the rate constant kinh = 1000 M−1·s−1, which is ten-fold smaller than for pentamethylchromanol (an analog of α-tocopherol). The reaction of NB-2 with peroxyl radicals was further studied via fluorescence measurements in methanol, with α,α′-azobisisobutyronitrile (AIBN) used as a source of radicals generated by photolysis or thermolysis, and in the micellar system at pH 7.4, with 2,2′-azobis(2-amidinopropane) (ABAP) used as a thermal source of the radicals. The reaction of NB-2 receptors with peroxyl radicals manifests itself by the strong increase of a fluorescence with a maximum at 612–616 nm, with a 14-fold enhancement of emission in methanol and a 4-fold enhancement in the micelles, as compared to the unoxidized probe. Our preliminary results indicate that NB-2 behaves as a “switch on” fluorescent probe that is suitable for sensing peroxyl radicals in an organic lipid environment and in bi-phasic dispersed lipid systems.


Introduction
There is much evidence of the harmful effects of excess amounts of Reactive Oxygen Species (ROS) resulting in oxidative stress, and consequently, in undesired effects for health [1][2][3][4][5][6][7][8]. Excessive generation of ROS correlates with mitochondrial dysfunction and increased receptor signaling in cells in general [9]. Lipids are the main components of biomembranes and their exposition to endogeneous or exogeneous ROS initiates a peroxidation affecting the assembly, composition, polarity, structure, and dynamics of cellular membranes, and finally, can lead to the death of the cell [10]. Once the peroxidation is triggered by radical forms of ROS attacking the lipid (LH, Reaction (1) in Scheme 1), the process is propagated by alkyl and alkylperoxyl radicals (L• and LOO•, respectively) and in cyclic reactions of H abstraction (Reaction (2)) and O 2 addition (Reaction (3)) tens and hundreds of lipid molecules are converted into the hydroperoxides until the process is terminated in Reaction (4).
A number of problems connected with the oxidative stress and with mechanism of action still remains unsolved. For example, some compounds designed to eliminate ROS, which positively passed tests in vitro, show dramatically low activity in vivo [11]; therefore, a deeper insight is needed into the localization of ROS and their interactions with other components of living cells. Cellular concentrations of ROS are usually at the pico to nanomolar level and can change rapidly [12], thus, the methods used for their monitoring should be fast, efficient, and highly sensitive. Additionally, a molecular marker for oxidative stress should neither affect the process to be monitored nor the components of the cell.
Among the main methods of ROS detection the Electron Paramagnetic Resonanse EPR a technique using spin traps (usually nitroxides or nitrones) can be conveniently applied to living organisms. However, the expensive equipment and advanced methodology of the interpretation of the results make EPR rather inaccessible for non-specialists. Another method, Magnetic Resonance Imaging (MRI) [13,14], is often too expensive and time consuming to be broadly used for monitoring the oxidative stress on the cellular level (in vitro and in vivo). ROS can also be monitored by fluorescence imaging [12,15,16], a technique employing molecules of a fluorescence probe (FP) that allows for the observation of processes in single cells or their parts (via confocal microscopy) [17]. FP should react with ROS faster than other biomolecules and such a reaction should result in a clear fluorescence response (on/off), even at low concentrations of ROS. Figure 1 presents examples of two FPs commonly used for the detection of intracellular ROS [18,19]. The diacetate form of dichlorodihydrofluorescein (DCFDA) after crossing the cell membrane is enzymatically hydrolyzed to polar form (DCFH, non-fluorescent), reacts (non-selectively) with ROS, and forms fluorescent DCF. Another commonly used FP, APF, is less sensitive, but more selective than DCFH. It reacts with • OH, HOCl, and ONOO -. DCFH and APF are the "switch on" fluorescent probes, their reaction with ROS result in fluorescent products. This is, however, not the only mechanism FPs can follow. Some FPs can act as "switch off" markers, i.e., their fluorescence is quenched after the reaction with ROS. In both cases, the fluorescence signal/intensity (on/off) of the whole molecule strictly depends on the reaction with ROS. In the first case, an electron is promoted from the ground state to the excited singlet state of the molecule: 1GS → 1ES* and the reaction of 1ES* with ROS results in a relaxation to a lower energy triplet state: 1ES* → 3ES*. Relaxation of this state can be either mediated again by triplet oxygen or can happen via a heat dissipation route. The second mechanism involves photoinduced electron transfer (PeT), that is, LUMO → LUMO transfer within the excited donor-acceptor pair [D*:A] → [D+:A−]*, then [D+:A−]* returns to the ground state either with or without photon emission (exciplex emission) with the subsequent return of electron to the donor (HOMO → HOMO) and decomposition of the D:A complex. The same PeT mechanism might operate for D and A covalently bonded as two structurally and functionally different segments. The first segment is responsible for the reaction with ROS and is called a receptor (R), while the second one is called a reporter (F) and is a fluorophore whose fluorescent properties will change depending on the redox status of R. Recently, Tang and coworkers designed a "switch on" type of FP with a tripolycyanamide scaffold as F and two catechol moieties as receptors for O 2 •− (Figure 2a) [20].  An example of a "switch off" catechol based sensor used for the detection of • OH and H2O2 is presented in Figure 2b [21]. The catechol functionality was also utilized in a dipyrrometheneboron difluoride (BODIPY) based fluorescent probe, shown in Figure 2c. This probe, however, is sensitive towards hypochlorous acid and hypochlorite [22]. Another probe, a lipophilic derivative of BODIPY (Figure 2d), with sensitivity to oxidation comparable to that of endogenous fatty acyl moieties, was proposed by Drummen and coworkers as FP for monitoring lipid peroxidation and antioxidant efficacy [23].
Recently, Cosa and his group designed a series of BODIPY-α-tocopherol (and other phenolic antioxidants) FPs with excellent sensitivity towards trace amounts of peroxyl and alkoxyl radicals ("switch on" probes, see Figure 3) [24][25][26][27][28].   An example of a "switch off" catechol based sensor used for the detection of • OH and H2O2 is presented in Figure 2b [21]. The catechol functionality was also utilized in a dipyrrometheneboron difluoride (BODIPY) based fluorescent probe, shown in Figure 2c. This probe, however, is sensitive towards hypochlorous acid and hypochlorite [22]. Another probe, a lipophilic derivative of BODIPY (Figure 2d), with sensitivity to oxidation comparable to that of endogenous fatty acyl moieties, was proposed by Drummen and coworkers as FP for monitoring lipid peroxidation and antioxidant efficacy [23].
Recently, Cosa and his group designed a series of BODIPY-α-tocopherol (and other phenolic antioxidants) FPs with excellent sensitivity towards trace amounts of peroxyl and alkoxyl radicals ("switch on" probes, see Figure 3) [24][25][26][27][28]. An example of a "switch off" catechol based sensor used for the detection of • OH and H 2 O 2 is presented in Figure 2b [21]. The catechol functionality was also utilized in a dipyrrometheneboron difluoride (BODIPY) based fluorescent probe, shown in Figure 2c. This probe, however, is sensitive towards hypochlorous acid and hypochlorite [22]. Another probe, a lipophilic derivative of BODIPY (Figure 2d), with sensitivity to oxidation comparable to that of endogenous fatty acyl moieties, was proposed by Drummen and coworkers as FP for monitoring lipid peroxidation and antioxidant efficacy [23].
Herein, we describe the synthesis and preliminary results obtained for a molecule in which the reporter moiety (BODIPY) is covalently bonded to two receptor segments, sensitive toward peroxyl radicals, i.e., two phenol moieties connected via double C=C bonds to position 3 and 5 of the BODIPY core (Scheme 1).  Phenolic segments in NB-2 are responsible for scavenging peroxyl radicals. In this particular case we deliberately used simple phenol moieties (monohydroxyl, non-hindered phenols) that are less reactive towards peroxyls than other natural antioxidants (tocopherols, carotenoids, and melatonin). Such a choice can be rationalized because our FP was designed for monitoring the system at the moment when other (more reactive) antioxidants have been consumed. The nitrophenyl moiety present at the meso-position of BODIPY is an example of a functional group that can be relatively easily converted into other functionalities in order to assemble the FP with other molecules or nanoparticles via the aromatic ring.

Chemicals and Reagents
Chemicals and reagents for synthesis: starting materials, reagents, and solvents were purchased from Sigma-Aldrich, Acros Organics and Combi-Blocks, and were used without any additional purification. The reaction progress was monitored by Thin Layer Chromatography performed on commercial Kieselgel 60, F254 silica gel plates with fluorescence-indicator UV254 (Merck, TLC silica gel 60 F254). For the detection of components, a UV light at λ = 254 nm or λ = 365 nm was used.
Herein, we describe the synthesis and preliminary results obtained for a molecule in which the reporter moiety (BODIPY) is covalently bonded to two receptor segments, sensitive toward peroxyl radicals, i.e., two phenol moieties connected via double C=C bonds to position 3 and 5 of the BODIPY core (Scheme 1).  Phenolic segments in NB-2 are responsible for scavenging peroxyl radicals. In this particular case we deliberately used simple phenol moieties (monohydroxyl, non-hindered phenols) that are less reactive towards peroxyls than other natural antioxidants (tocopherols, carotenoids, and melatonin). Such a choice can be rationalized because our FP was designed for monitoring the system at the moment when other (more reactive) antioxidants have been consumed. The nitrophenyl moiety present at the meso-position of BODIPY is an example of a functional group that can be relatively easily converted into other functionalities in order to assemble the FP with other molecules or nanoparticles via the aromatic ring.

Chemicals and Reagents
Chemicals and reagents for synthesis: starting materials, reagents, and solvents were purchased from Sigma-Aldrich, Acros Organics and Combi-Blocks, and were used without any additional purification. The reaction progress was monitored by Thin Layer Chromatography performed on commercial Kieselgel 60, F254 silica gel plates with fluorescence-indicator UV254 (Merck, TLC silica gel 60 F254). For the detection of components, a UV light at λ = 254 nm or λ = 365 nm was used.
Phenolic segments in NB-2 are responsible for scavenging peroxyl radicals. In this particular case we deliberately used simple phenol moieties (monohydroxyl, non-hindered phenols) that are less reactive towards peroxyls than other natural antioxidants (tocopherols, carotenoids, and melatonin). Such a choice can be rationalized because our FP was designed for monitoring the system at the moment when other (more reactive) antioxidants have been consumed. The nitrophenyl moiety present at the meso-position of BODIPY is an example of a functional group that can be relatively easily converted into other functionalities in order to assemble the FP with other molecules or nanoparticles via the aromatic ring.

Chemicals and Reagents
Chemicals and reagents for synthesis: starting materials, reagents, and solvents were purchased from Sigma-Aldrich, Acros Organics and Combi-Blocks, and were used without any additional purification. The reaction progress was monitored by Thin Layer Chromatography performed on commercial Kieselgel 60, F254 silica gel plates with fluorescence-indicator UV254 (Merck, TLC silica gel 60 F254). For the detection of components, a UV light at λ = 254 nm or λ = 365 nm was used.
2.2. General Information mm, Fluka. Melting points were recorded using the OptiMelt Automated Melting Point System from Stanford Research Systems.
Method B (see Scheme 1): Under nitrogen atmosphere 2,4-dimethylpyrrole (0.610 mL, 5.93 mmol, 2.2 equiv.) was slowly added to a DCM (50 mL) solution of 4-nitrobenzoyl chloride (500 mg, 2.69 mmol). The reaction mixture was stirred overnight at room temperature. Next, the flask was opened and TEA (3.00 mL, 21.5 mmol, 8.0 equiv.) was added and the reaction mixture was stirred (still open) for an hour. Then, the flask was closed, flushed with N 2 , and BF 3 etherate (4.00 mL, 32.4 mmol, 12 equiv.) was quickly added (fast drop by drop or a steady stream). After stirring the reaction mixture for the next hour, the solvents were evaporated and the crude mixture was purified by flash chromatography (dry loading) using pentane/diethyl ether (gradient 3/1 −> 2/1; v/v) as the eluent. Compound NB-1 was obtained as red precipitate (670 mg, 67% yield). Both methods gave the same compound: 1 [29].

Preparation of Micelles
The micelles were prepared using a methodology described in our previous kinetic studies [30,31]. Glass test-tubes with 19 µL of methyl linoleate (LinMe) and 10.5 mL of 16 mM Triton X-100 were stirred using Vortex for 60 sec. Then, 10.5 mL of buffer was added and the mixture was shaken again for 60 s.

Methodology of Autoxidation Measurements
The ability of NB-2 to trap peroxyl radicals was evaluated by monitoring the rate of peroxidation of methyl linoleate dispersed in the micellar system. The uptake of dissolved oxygen during peroxidation of micelles was carried out at 37 • C by using a RC650 Respirometer (Strathkelvin Instruments) equipped with a Clark-type electrode in the same way as described in one of our previous papers [30][31][32]. The samples were buffered at pH 7.0 with a Tris buffer and the chambers with magnetic stirring, containing 3 mL of micelles were saturated with oxygen. The electrode was placed inside the chambers and peroxidation was initiated by the injection of water solution of ABAP (final concentration 10 mM). After 10% of oxygen was consumed, 10 µL of the studied compound (PMHC, NB-1, NB-2) in ethanol was added. In this way, the final concentration of the added compounds was 1.0 µM).

UV-vis Studies of Stability and Reactivity in Methanol and in Micelles
UV-vis spectra of NB-2 were recorded on Varian Cary 50 spectrometer (Agilent Technologies, Santa Cara, CA, USA) using quartz cuvettes QS with 10 mm optical path length. Stability measurements: the UV-vis spectra were recorded for 180 min for NB-2 in methanol at 37 • C. For reactivity studies in methanol, peroxyl radicals were generated from AIBN by thermolysis (30,37 and 50 • C, spectra were recorded every 5 min) or photolysis (ambient temperature).
For studies of reactivity with peroxyl radicals in micelles at pH 4.0 and 7.0, water soluble initiator (ABAP) was used: 130 µL NB-2 in ethanol and 100 µL of aqueous solution of ABAP were injected to a quartz cuvette (with magnetic stirring), containing 2 mL of micelles. The final concentrations were 2.73 mM LinMe, 8 mM Triton X-100, 25 mM ABAP, 9.0 µM NB-2. UV-vis spectra were recorded every 15 min.

Spectrofluorometric Measurements
Spectrofluorometric measurements were performed on Cary Eclipse fluorescence spectrophotometer equipped with Peltier System and magnetic stirrer (Agilent Technologies, Santa Cara, CA, USA). Measurements were performed in the liquid phase (methanol or micellar system) using quartz cuvettes QS for fluorescence with 10 mm optical path length. The most frequently used configuration parameters were λ ex = 575 nm, slit = 5 and 5 nm, and gain = medium.
Experiments in methanol: a stock solution of AIBN in methanol was added with a syringe into a thermostated quartz cell containing NB-2 dissolved in methanol. The final concentrations were 15 or 10 µM of NB-2 and 5 mM AIBN. For micellar systems, water soluble azo-initiator (ABAP) was used, but the employed methodology remained the same, and the samples contained 2.73 mM LinMe, 8 mM Triton X-100, 10 µM NB-2, and 10 mM ABAP. Automatic spectra collection was immediately started after the initiator was injected into the sample. The sample solution inside the cuvettes was non-stop stirred with a magnetic stirrer. Excitation and emission spectra were recorded at room temperature or at 30, 37, and 50 • C, depending on the experiment. Temperature, time of experiment, and intervals for spectra collection varied between experiments and are described for every measurement individually.

Photolysis of AIBN
In order to produce peroxyl radicals by the photolytic decomposition of AIBN, a solution of 15 µM NB-2 in methanol was placed in a fluorescence quartz cell (optical path 10 mm) and methanolic solution of AIBN was injected into it with a glass microsyringe (final concentration of AIBN was 5 mM). The solution was continuously stirred with a magnetic bar and the cell was periodically irradiated for 5 s with 365 nm UV High Power LED irradiation (2.7 W and 1200 mW radiant power). After every 60 s, an emission spectrum was recorded and the process was repeated for the same sample. Measurements were conducted at room temperature. The photography of UV irradiation chamber is presented in Figure S5 (Supplementary Material). The same methodology was used for UV-vis measurements.

Synthesis and Spectral Chracteristics of NB-2
NB-1 was prepared using two different methods. As the yield of the product obtained by method A was not satisfactory, we employed the conditions described in method B, see Scheme 1. With acyl chloride instead of aldehyde as the substrate, the synthesis of NB-1 was much cleaner, and the compound could be easily isolated with a 67% overall yield. Then, Knoevenagel condensation was carried out in refluxing acetonitrile with freshly dried molecular sieves, as proposed by Cicchi and coworkers [33]. This method gave NB-2 with a satisfactory yield of 40%. NB-2 is soluble in alcohols (methanol, ethanol), acetonitrile, THF, ethyl acetate, and acetone. Moderate solubility is observed in CH 2 Cl 2 and CHCl 3 . We did not measure the octanol/water partition coefficient, but we roughly assumed that NB-2 should be similar or even more lipophilic than the fluorescent probe with carboxyl functionality presented in Figure 2d, for which Drummen et al. determined logP = 2.49 ± 0.04 at pH 7.4 (i.e., in its anionic form) [23]. Figure 4 shows the absorption and emission spectra of NB-2 in methanol at 23 • C. The compound had its absorption maximum at λ = 647-653 nm (molar absorptivity has been calculated as ε 649nm = 5.1 × 10 4 M −1 ·cm −1 ) with a shoulder band with a local maximum at 596 nm, and strong absorption at 373 nm (ε 373nm = 3.0 × 10 4 M −1 ·cm −1 ).
In most cases, boron dipyrromethene difluoride (BODIPY)-based dyes are fluorochromes that display bright green fluorescence in the range of 450 to 550 nm. NB-2 is a derivative in which the boron dipyrromethene difluoride core is substituted with a nitrophenol at the meso-position, and two phenolic moieties via stilbene-like interconnections. Due to the extended conjugation, the intact NB-2 displays a bright red fluorescence (see photography/ Figure S5) with an emission maximum at 674 nm (red dashed line in Figure 4).
Stability of NB-2 in aerated methanol at 37 • C was examined using UV-vis measurements (for details, see Figure S6). No changes in the absorbance of the compound were observed during at least 180 min. Considering the fact that most further measurements conducted in this study lasted max. 120 min in similar conditions, we can assume that all of the color and emission changes that occurred during tests came from the reaction with radicals.  Stability of NB-2 in aerated methanol at 37 °C was examined using UV-vis measurements (for details, see Figure S6). No changes in the absorbance of the compound were observed during at least 180 min. Considering the fact that most further measurements conducted in this study lasted max. 120 min in similar conditions, we can assume that all of the color and emission changes that occurred during tests came from the reaction with radicals.

Kinetic Parameters of Reaction of NB-2 with Peroxyl Radicals
Two features are crucial for a molecule to be used as FP for sensing /imaging peroxyl radicals: (i) the molecule should exhibit relatively high reactivity toward alkylperoxyl radicals, and (ii) such a reaction should result in an increase or decrease of fluorescence (switch on/off FP). Therefore, in the first step, we examined the ability of NB-2 to react with peroxyl radicals mediating lipid peroxidation in a micellar system. We selected methyl linoleate (LinMe) as a lipid representing polyunsaturated fatty acids (PUFA)-the constituents of natural lipid bilayers and biomembranes. During the measurement, thermal decomposition of water soluble azo-initiator ABAP produces primary radicals (R•) that are immediately converted into water soluble peroxyl radicals able to abstract the H atom from the weakest C-H bond (bis-allyl position) at the LinMe molecule. This process is regarded as the initiation of peroxidation (Reaction (1)) and triggers the propagation described by Reactions (2) and (3). The typical plot of oxygen consumption of such spontaneous PUFA peroxidation is presented in Figure 5 as curve 1, with the rate of oxidation Rox = d[O2]/dt.

Kinetic Parameters of Reaction of NB-2 with Peroxyl Radicals
Two features are crucial for a molecule to be used as FP for sensing /imaging peroxyl radicals: (i) the molecule should exhibit relatively high reactivity toward alkylperoxyl radicals, and (ii) such a reaction should result in an increase or decrease of fluorescence (switch on/off FP). Therefore, in the first step, we examined the ability of NB-2 to react with peroxyl radicals mediating lipid peroxidation in a micellar system. We selected methyl linoleate (LinMe) as a lipid representing polyunsaturated fatty acids (PUFA)-the constituents of natural lipid bilayers and biomembranes. During the measurement, thermal decomposition of water soluble azo-initiator ABAP produces primary radicals (R•) that are immediately converted into water soluble peroxyl radicals able to abstract the H atom from the weakest C-H bond (bis-allyl position) at the LinMe molecule. This process is regarded as the initiation of peroxidation (Reaction (1)) and triggers the propagation described by Reactions (2) and (3). The typical plot of oxygen consumption of such spontaneous PUFA peroxidation is presented in Figure 5 as curve 1, with the rate of oxidation R ox = d[O 2 ]/ dt. The rate of peroxidation can be significantly reduced in the presence of small amounts of chain-breaking antioxidants (CBA)-small molecules, mainly phenols, thiols, aromatic amines, or terpenoids that sacrificially eliminate peroxyl radicals from the propagation chain, Reaction (5) [34]. The rate of peroxidation can be significantly reduced in the presence of small amounts of chain-breaking antioxidants (CBA)-small molecules, mainly phenols, thiols, aromatic amines, or terpenoids that sacrificially eliminate peroxyl radicals from the propagation chain, Reaction (5) [34].
Three features are important to be effective CBAs: first, their reaction with radicals (Reaction (5)) should be much faster than the propagation step of peroxidation (k inh >> k 3 ), secondly, the products of Reaction (5) should not be highly reactive radicals themselves, and finally, as the propagation occurs within a lipid membrane, an efficient CBA should be localized inside it. An example of such a compound is PMHC (2,2,5,7,8-pentamethylchroman-6-ol), an analogue of α-tocopherol (the most active natural CBA). The addition of 1.0 µM PMHC into the system causes a lag phase (induction period within time τ, see curve 2 in Figure 5). The observed time τ is dependent on the initial concentration of antioxidant, [ArOH] 0 , and the rate of initiation, R i : R i can be determined from transformed Equation (6) when τ is measured for a known concentration of PMHC as a standard CBA, for which n = 2.0. The inhibition rate constant k inh can be determined from an integral form of the rate equation: where ∆[O 2 ] t stands for molar oxygen consumption [M] recorded at time t within the induction period (t < τ). With k p = 36 M −1 ·s −1 for methyl linoleate dispersed in Triton X-100 micelles (assuming the same k p as in SDS micelles [35]), we calculated k inh for PMHC and for NB-2. The obtained kinetic parameters are listed in Table 1. Derivative NB-1 (without phenol moieties) showed a slight retarding effect on the studied reaction, (see line 3 in Figure 5), but its activity was not sufficient to effectively break the peroxidation chain and no induction period was observed. Table 1. The lengths of induction periods, τ, the rates of initiation, R i , the slow-down factor (R ox /R inh , the ratio of the rate of non-inhibited process to the rate of inhibited process), and the inhibition rate constants, k inh , calculated for autoxidation of 2.73 mM LinMe dispersed in 8 mM Triton X-100 micelles in the presence of 1 µM PMHC, or NB-1, or NB-2. The experiments were performed at 37 • C and pH 7.0. Peroxidation was initiated by 10 mM ABAP. Each measurement was run 4-6 times (see Table S1). Values are expressed as the mean ± standard deviation (SD).

Experimental System
a For R i determination, see Equation (6). b The (R ox /R inh ) ratio informs how many times the inhibited oxidation is slower than spontaneous (non-inhibited) process, with R ox = (4.3 ± 0.3) × 10 −7 Ms −1 . It can be also considered as the ratio of the kinetic chain length (the number of propagating cycles) of the inhibited to non-inhibited process. c For this system, the inhibition period was not detected (see curve 3 in Figure 5) and the rate of the retarded process is listed.
Compound NB-2 has a noticeable effect on the rate of methyl linoleate peroxidation, decreasing it considerably, from R ox = (4.3 ± 0.3) × 10 −7 Ms −1 for spontaneous peroxidation to R inh = (0.9 ± 0.1) × 10 −7 Ms −1 for the sample containing 1 µM of NB-2 ( Figure 5), with the induction period τ ind = 20.2 ± 0.8 min (average of 6 measurements). Based on eq. 7, we calculated the bimolecular rate constant for reaction of NB-2 with peroxyl radicals, k inh = 1000 ± 100 Ms −1 , as it would be expected for a moderate antioxidant. In this case, we regarded the reactivity of NB-2 being one order of magnitude smaller than tocopherols analogue (PMHC) as an advantage because the compound will perform its reporting role when other, more reactive antioxidants are exhausted in the system. Finally, from rearranged equation 6, with R i , [NB-2] 0 and τ (in seconds) taken from Table 1, the stoichiometric coefficient n = 5.3 was calculated for NB-2. This parameter exceeds the predicted number of four radicals scavenged by two phenolic moieties, however, the presence of a double C=C bond conjugated with an aryl ring provides additional susceptibility to trap more radicals than could be expected for simple phenols.

UV-vis and Spectrofluorimetric Study of the Reaction of NB-2 with Peroxyl Radicals in Methanol
With the knowledge that NB-2 reacts with the peroxyl radicals mediating the peroxidation chain in a water/lipid biphasic system, we investigated whether this radical trapping molecule could report on the presence of peroxyl radicals. Figure 6 presents the results of several experiments monitoring the photochemical response of NB-2 to peroxyl radicals generated from AIBN. At room temperature, during the photodissociation of AIBN in the liquid phase alkyl radicals are being produced with a moderately high quantum yield of ca. 0.44 (in benzene) [36], Reaction (8).
3 in Figure 5) and the rate of the retarded process is listed.
Compound NB-2 has a noticeable effect on the rate of methyl linoleate peroxidation, decreasing it considerably, from Rox = (4.3 ± 0.3) × 10 −7 Ms −1 for spontaneous peroxidation to Rinh = (0.9 ± 0.1) × 10 −7 Ms −1 for the sample containing 1 µM of NB-2 ( Figure 5), with the induction period τind = 20.2 ± 0.8 min (average of 6 measurements). Based on eq. 7, we calculated the bimolecular rate constant for reaction of NB-2 with peroxyl radicals, kinh = 1000 ± 100 Ms −1 , as it would be expected for a moderate antioxidant. In this case, we regarded the reactivity of NB-2 being one order of magnitude smaller than tocopherols analogue (PMHC) as an advantage because the compound will perform its reporting role when other, more reactive antioxidants are exhausted in the system. Finally, from rearranged equation 6, with Ri, [NB-2]0 and τ (in seconds) taken from Table 1, the stoichiometric coefficient n = 5.3 was calculated for NB-2. This parameter exceeds the predicted number of four radicals scavenged by two phenolic moieties, however, the presence of a double C=C bond conjugated with an aryl ring provides additional susceptibility to trap more radicals than could be expected for simple phenols.

UV-vis and Spectrofluorimetric Study of the Reaction of NB-2 with Peroxyl Radicals in Methanol
With the knowledge that NB-2 reacts with the peroxyl radicals mediating the peroxidation chain in a water/lipid biphasic system, we investigated whether this radical trapping molecule could report on the presence of peroxyl radicals. Figure 6 presents the results of several experiments monitoring the photochemical response of NB-2 to peroxyl radicals generated from AIBN. At room temperature, during the photodissociation of AIBN in the liquid phase alkyl radicals are being produced with a moderately high quantum yield of ca. 0.44 (in benzene) [36], Reaction (8).
(8) Figure 6. (A) absorption spectra of solution of 15 µM NB-2 and 5 mM AIBN in methanol. Sample (optical path 10 mm) was periodically exposed to 5 sec. irradiation with 365 nm UV High Power LED; then, after 1 min, the spectrum was taken and the process was repeated for the same sample. (B) Emission spectra recorded with the same methodology of irradiation (λ ex = 575 nm, slit = 5 and 5 nm, and gain = high).
In an oxygen saturated solvent, once the R• radicals escape from the solvent cage (the cage effect), they immediately react with O 2 producing peroxyl radicals (Reaction (2), with k 2~1 0 9 M −1 ·s −1 ). In our experiment, a sample of 5 mM AIBN in methanol containing 15 µM NB-2 was periodically exposed to 365 nm UV light (5 s), and after 60 s, the absorbance and emission spectra were recorded (separate series of experiments). The obtained UV-vis spectra are presented in Figure 6A, demonstrating that oxidation (H atom abstraction from phenolic moieties, NB-2 → NB-2 ox ) is accompanied by a ten-fold decrease of the absorbance at λ = 647 nm, a three-fold decrease at 373 nm and a two-fold increase of the absorbance at λ max at 575 nm. Consequently, we decided to use 575 nm as the excitation wavelength for NB-2 ox . Figure 6B presents the emission spectra a sample of NB-2 reacting with peroxyl radicals (separate series but the same concentrations and conditions). As the oxidation of NB-2 progresses, an intensive emission for NB-2 ox appears with a maximum at λ = 605-615 nm. The intensity of the initial red fluorescence at 674 nm originating from parent molecule (NB-2) increases much slower and overlaps with the aforementioned band at 605-615 nm. Emission intensity measured at 612 nm undergoes a ca. 14-fold enhancement, suggesting that NB-2 is a promising candidate for a fluorescent probe for peroxyl radicals.
In the next series of experiments, the radicals were generated by thermolysis of AIBN in methanol. The quartz cell with the sample was placed in a thermostated pocket of the spectrofluorometer and emission at 612 nm was monitored on-line within 120 min. Upon thermolysis, the same primary alkyl radicals were produced (Reaction (9)) as during the photolysis of AIBN.
In an air-saturated solution, R• were immediately converted into peroxyl radicals (Reaction (2)), thus, peroxyl radicals were generated with a constant rate R g = 2 f k d [AIBN] and under 5 mM initial concentration of AIBN with k d = 0.28 × 10 −6 s −1 at 37 • C and 2.2 × 10 −6 s −1 at 50 • C in benzene [37] with the assumption that f~0.5 [38] the values of R g are 1.5 nMs −1 at 37 • C and 11 nMs −1 at 50 • C. This first value is comparable to R i , which was determined during peroxidation of LinMe in the micellar system in Section 3.2.
The emission spectra presented in Figure 7A-C show that the progress of oxidation (H atom abstraction from phenolic hydroxyl groups) is manifested by the increased emission at 612 nm. The slopes of the lines in panel D can be considered as representations of the rates of oxidation of NB-2. The comparison of those slopes gives relative rates of oxidation 1:4:23 for the processes carried out at 30, 37, and 50 • C, respectively, which is in good agreement with the accessible rate constants, k d , for thermolysis of AIBN (Reaction (9)) and with k d calculated from the Arrhenius equation with E a = 128.9 kJ/mol and logA = 15.19 s −1 [38]. In both kinds of experiments carried out in methanol, with peroxyl radicals generated by photolysis and thermolysis of AIBN, we observed a maximal 14-fold fluorescence enhancement. Such enhancement cannot be assigned to processes other than the reaction with peroxyl radicals (we exclude the reaction with molecular oxygen even during prolonged time, vide supra, and see Figure S6). Therefore, we assume that the oxidized form of NB-2 is responsible for emission at 605-612nm and 674 nm. Scheme 2 presents a proposed mechanism of a two-step oxidation of one receptor segment of NB-2: H atom abstraction from the phenolic hydroxy group by a peroxyl radical and a subsequent recombination of the formed phenoxyl radical with another peroxyl. This proposed mechanism is in accordance with the standard mechanism of reaction of peroxyl radicals with derivatives of hydroxycinnamic acids, such as p-coumaric, caffeic, ferulic, and sinapic acids [39]. Since recombination of phenoxyl radical with ROO• is very fast (for para-substituted phenols kr In both kinds of experiments carried out in methanol, with peroxyl radicals generated by photolysis and thermolysis of AIBN, we observed a maximal 14-fold fluorescence enhancement. Such enhancement cannot be assigned to processes other than the reaction with peroxyl radicals (we exclude the reaction with molecular oxygen even during prolonged time, vide supra, and see Figure S6). Therefore, we assume that the oxidized form of NB-2 is responsible for emission at 605-612 nm and 674 nm. Scheme 2 presents a proposed mechanism of a two-step oxidation of one receptor segment of NB-2: H atom abstraction from the phenolic hydroxy group by a peroxyl radical and a subsequent recombination of the formed phenoxyl radical with another peroxyl. This proposed mechanism is in accordance with the standard mechanism of reaction of peroxyl radicals with derivatives of hydroxycinnamic acids, such as p-coumaric, caffeic, ferulic, and sinapic acids [39]. Since recombination of phenoxyl radical with ROO• is very fast (for para-substituted phenols k r > 10 8 M −1 ·s −1 [36]), the first reaction, H atom abstraction, with k inh = 10 3 M −1 ·s −1 will be the rate determining step. Each hydroxycinnamyl residue can react with two peroxyl radicals, giving n = 4, which is smaller than the experimentally determined n > 5 (Section 3.2). This effect can be explained by the possible addition of the next ROO• to double the C=C bond in structures a2 and a3.
In both kinds of experiments carried out in methanol, with peroxyl radicals generated by photolysis and thermolysis of AIBN, we observed a maximal 14-fold fluorescence enhancement. Such enhancement cannot be assigned to processes other than the reaction with peroxyl radicals (we exclude the reaction with molecular oxygen even during prolonged time, vide supra, and see Figure S6). Therefore, we assume that the oxidized form of NB-2 is responsible for emission at 605-612nm and 674 nm. Scheme 2 presents a proposed mechanism of a two-step oxidation of one receptor segment of NB-2: H atom abstraction from the phenolic hydroxy group by a peroxyl radical and a subsequent recombination of the formed phenoxyl radical with another peroxyl. This proposed mechanism is in accordance with the standard mechanism of reaction of peroxyl radicals with derivatives of hydroxycinnamic acids, such as p-coumaric, caffeic, ferulic, and sinapic acids [39]. Since recombination of phenoxyl radical with ROO• is very fast (for para-substituted phenols kr > 10 8 M −1 ·s −1 [36]), the first reaction, H atom abstraction, with kinh = 10 3 M −1 ·s −1 will be the rate determining step. Each hydroxycinnamyl residue can react with two peroxyl radicals, giving n = 4, which is smaller than the experimentally determined n > 5 (Section 3.2). This effect can be explained by the possible addition of the next ROO• to double the C=C bond in structures a2 and a3. Scheme 2. Reaction the hydroxycinnamyl residue (single one is presented for simplicity) with two peroxyl radicals ROO• and the formation of three isomeric products of recombination. Scheme 2. Reaction the hydroxycinnamyl residue (single one is presented for simplicity) with two peroxyl radicals ROO• and the formation of three isomeric products of recombination.

UV-vis and Spectrofluorimetric Study of the Reaction of NB-2 with Peroxyl Radicals in Micelles
Using the excitation wavelength 575 nm (see previous section) for the visualization of oxidized NB-2 is advantageous as for λ > 500 nm the signal distortion caused by autofluorescence in the biological and biology relevant systems is minimal. From this point of view, NB-2 should be a highly suitable FP used for monitoring the peroxidation reactions however, some other environmental and microenvironmental factors can affect fluorescence and detectability, for example: pH changes, solvent polarity, background fluorescence, light scattering, and interactions of the fluorochrome with other fluorochromes present in the sample. Even though experiments with biological systems are beyond the scope of this preliminary report, we decided to check the behavior of NB-2 in a micellar system the same as for the kinetic measurements described in Section 3.2, with ABAP producing the peroxyl radicals with the same rate of initiation, R i = 4.3 nMs −1 (see Table 1). The emission spectra recorded for every 2.5 min during the peroxidation reaction are collected in Figure 8. The emission spectrum of NB-2 in the micellar system before the oxidation started ( Figure 8, red line, see also Figure S3) shows two bands with similar intensity: the first one with maximum absorbance at 674 nm and a second one at 616 nm. The cumulative plot presented in Figure 8 (inset) shows that the increase of emission recorded in the micellar system follows the same trend as in methanol (with AIBN). The observed 3.9-fold increase of fluorescence intensity during 20 min of reaction is lower than the analogous one in methanol, but is comparable to the 4-fold increase in emission observed by Cosa for his probe B-TOH ( Figure 3) tested in phospholipid DMPC vesicles at pH 7.4 with the radicals generated with ABAP [25]. After 25 min of peroxidation, a slow decrease in emission (Figure 8, inset) can be noticed as an effect of radical-mediated BODIPY degradation at further stages of peroxidation [40]. same trend as in methanol (with AIBN). The observed 3.9-fold increase of fluorescence intensity during 20 min of reaction is lower than the analogous one in methanol, but is comparable to the 4-fold increase in emission observed by Cosa for his probe B-TOH (Figure 3) tested in phospholipid DMPC vesicles at pH 7.4 with the radicals generated with ABAP [25]. After 25 min of peroxidation, a slow decrease in emission (Figure 8, inset) can be noticed as an effect of radical-mediated BODIPY degradation at further stages of peroxidation [40].  We also monitored the changes in absorbance during the prolonged oxidation (3 h) carried out in the micellar system at pH 4.0 and 7.0. UV-vis spectra for these measurements recorded every 15 min during peroxidation are presented in the Supplementary Material ( Figure S7 for stability test without peroxidation, and Figures S8 and S9 for peroxidation at pH 7 and pH 4). The observed effects are the same as for the reactions carried out in methanol, i.e., a slow decrease of intensity of broad bands with λ max at 373 and 660 nm and parallel build-up of the bands at 587 and 513 nm.

Conclusions
We designed and prepared a fluorescent probe NB-2 and described its use for the detection of peroxyl radicals. This probe is composed of two receptor segments (4-hydroxycinnamyl moieties) sensitive towards peroxyl radicals that are conjugated with a fluorescent reporter, dipyrrometheneboron difluoride (BODIPY), whose emission changes depend on the oxidation state of the receptors.
According to the oxygen intake measurements performed with a Clark-type oxygen electrode, NB-2 behaves like a moderate chain-breaking antioxidant during the peroxidation of methyl linoleate (LinMe) in Triton X-100 at pH 7, initiated with a water soluble azo-initiator, ABAP, at 37 • C. In this system, the rate constant for a reaction with peroxyl radicals (k inh ) is 1000 ± 100 M −1 ·s −1 , being one order of magnitude smaller than k inh for reaction of PMHC (an analogue of α-tocopherol). The stoichiometric coefficient, n, determined for NB-2 in this system, is above five, indicating that peroxyl radicals are trapped not only by phenolic moieties (which would result in n = 4), but also by other structural parts of NB-2.
The reporter segment of NB-2 absorbs and emits light in the visible region of the spectrum (λ > 500 nm). The whole molecule shows thermal stability (up to 3 h in methanol saturated with oxygen) and chemical stability upon 30 min exposition to peroxyl radicals. UV-vis and spectrofluorimetric experiments demonstrated that NB-2 yields a highly fluorescent product upon scavenging peroxyl radicals in a homogeneous solution (methanol), with AIBN used as a source of radicals generated by photolysis or thermolysis, and in a micellar system (LinMe/Triton X-100, pH 7), with ABAP used as a thermal source of peroxyl radicals. The emission enhancement upon such exposition to peroxyls is 14-fold in methanol and 4-fold in the micelles.
The preliminary results presented in this report show that NB-2 is a promising novel lipophilic fluorescent "switch on" probe. Detailed photochemical characteristics, studies of selectivity and interactions with other antioxidants, measurements carried out in biologically relevant systems, and possible applications of NB-2 will be presented in a full paper.
Author Contributions: Individual contributions of the authors: conceptualization, G.L., methodology of synthesis: K.S., synthesis: K.S., J.K., methodology of fluorometric and spectrophotometric measurements: J.K., and kinetic studies, J.K., A.K.; manuscript writing, editing and reviewing, all authors; supervision, G.L. All authors have read and agreed to the published version of the manuscript.