ANATOMICAL STUDIES ON THE ASSOCIATION OF ENDOPHYTIC FUNGI AND THEIR ISOLATION FROM

. In the T.S of lamina, fungal hyphae are seen in the epidermis and also in the mesophyll tissue beneath the epidermal layer. Three endophytic fungi namely Aspergillus niger , Diaporthe longicolla and Schizophyllum commune were isolated and characterized using their ITS region


INTRODUCTION
Endophytes live inside the tissues of all plants without any sign of diseases (Petrini, 1991).Endophytes confer greater resistance to host against biotic and abiotic stresses, protects the plant against phytopathogens and produce chemical metabolites similar to that of the host (Bayat et al., 2009;Gundel et al., 2010).Endophytic fungi mainly include Ascomycota, Basidiomycota and Zygomycota (Tao et al., 2013).Microbes are the source of innumerable enzymes and secondary metabolites which have many applications in the biotechnology arena (Strobel & Daisy 2003).The presence of fungi inside the living leaves is detected mostly by culturedependent methods.Endophytic fungal hyphae present within the plant tissues are examined directly under light or electron microscope in the direct observation method.By this method even unculturable fungi can also be detected (Deckert et al., 2001;Lucero et al., 2011).Direct observation using anatomical studies for the presence of fungal hyphae inside the leaves have been reported less (Deckert et al., 2001).Hence the current study was developed to locate the endophytic fungi inside the tissues of leaf and to isolate them.The plant chosen is an ethno medicinally important one, Alangium salviifolium.Each and every part of this plant is used in Siddha and Ayurveda.The plant belongs to the family Alangiaceae.The common name is sage leaved Alangium.It is a thorny tree and grows up to a height of 5 -10m.It has antidiabetic (Kumar et

Collection of specimens
The plant material was collected from the Mambakkam forest area, Chennai.The fresh and healthy leaves of the plant were processed in the laboratory after collection.The collected plant was identified as Alangium salviifolium by Dr. P. Jayaraman, PARC, Tambaram (Voucher NO.PARC/2019/4044).The required leaf samples were cut and fixed in FAA (Formalin-5ml + Acetic acid-5ml + 70% Ethyl alcohol-90ml).After 24hrs, graded series of tertiary Butyl alcohol was used for dehydration of specimens as given by Sass, 1940.Paraffin was infiltrated gradually until saturation.The specimens were cast into paraffin blocks.

Sectioning
The paraffin embedded specimens were sectioned (10-12 µm thickness) using Rotary Microtome.Dewaxing of the sections was by the customary procedure (Johansen, 1940).The sections were stained with toluidine blue, a polychromatic stain, as per the method published by O'Brieu et al., (1964).The cellulose walls were stained pink colour, lignified cells and protein bodies as blue and suberin as dark green etc. Safranin and fast green were also used wherever necessary.The temporary preparations were mounted in glycerin and observed under microscopy.Nikon labphoto 2 microscopic unit was used to take photographs of different magnifications.Anatomical features were described as given in the standard Anatomy books (Esau, 1964).

Isolation of endophytes
The fresh and healthy leaves of plant were processed in laboratory after collection.The collected leaves were surface sterilized and cut it into small pieces of 1 cm which was placed on the Potato Dextrose Agar medium for isolation of endophytic fungi.Streptomycin was added to the medium to suppress bacterial contamination.The cultures were incubated for 3 weeks at 28°C in laboratory condition.After incubation period, colonies were isolated, subcultured and identified.

Molecular characterization
Fungal DNA was isolated using the NucleoSpin ® Plant II Kit (Macherey-Nagel).Primers ITS-1F (TCCGTAGGTGAACCTGCGG) and ITS-4R (TCCTCCGCTTATTGATATGC) were used to amplify the fungal DNA.The quality of DNA was checked using agarose gel electrophoresis.The PCR mixture (20µl total volume) contained 10.8 µl Milli Q water, 2 µl each of dNTP mix, Taq buffer and both the forward and reverse primers, 1 µl DNA template and 0.2 µl of Taq DNA Polymerase.Thirty five cycles were run each with denaturation step at 94⁰C, annealing at 50⁰C and extension step at 72⁰C.After 35 th cycle, Final extension @ 72⁰C for 7 minutes was carried out.The PCR products were electrophoresed in agarose gel and sequenced in applied biosystems 3500 genetic analyzer and the sequences were submitted to GenBank.The sequences were compared using the NCBI BLAST program.Phylogenetic relationship was established by the neighbor joining method in MEGA software.
The present research was carried out to determine the anatomical features of leaves of Alangium salviifolium and their endophytic fungal association.Alangium salviifolium is an important medicinal plant with various activities reported.It is suggested that the medicinal property of the plant is either because of their endophytes or the endophytes inherit the medicinal properties from their host plant.Hence the detailed study of plant-microbe interaction is important.The anatomical features revealed the fungal mycelium in the ground cells of the abaxial midrib, the adaxial segment of xylem in the midrib.In the T.S of lamina, fungal hyphae are seen in the epidermis and also in the mesophyll tissue beneath the epidermal layer.Three endophytic fungi namely Aspergillus niger, Diaporthe longicolla and Schizophyllum commune were isolated and characterized using their ITS region.

RESULTS AND DISCUSSION
The leaf sections showed the presence of endophytic fungi.In cross sectional view the leaf exhibits thick midrib and thin smooth lamina.The midrib has a wide semicircular abaxial arc, vascular strand and somewhat smaller adaxial flat segment of vascular strand (Figure 1.1 & 2).The ground tissue of the abaxial midrib has a thin arc of fungal invested region.This region is thin and darkly stained.Some of the ground cells of the abaxial midrib also possess fungal mycelium (Figure 1.2).There is no fungal mycelium in the phloem cells or xylem cells (Figure .2).The plant tissues specifically leaves were the repository for the endophytic fungi as per earlier reports.The endophytic fungi were cultured on PDA and after 3 weeks of incubation they were subcultured for pure culture.Molecular identification of all 3 fungi has been successfully carried out for the identification of endophytic fungi.DNA was isolated from fungal mycelium and sequenced with ITS1 and ITS 4 primers.The NCBI BLAST search for similarity revealed the closest match to Aspergillus niger (MT090011), Diaporthe longicolla (MN173138) and Schizophyllum commune (MH857808) respectively.The sequences were submitted in GenBank and provided with accession number (Table 1).Phylogenetic tree were constructed (Figure 7

CONCLUSION
The localization of endophytic fungi associated with Alangium salviifolium was reported for the first time in this study.Endophytes are a promising tool for the development of antibiotic resistant drugs and to protect the plant from phytopathogens.Hence further detailed study of these endophytic fungi associated with this plant is currently being undertaken which would give us insight into their various bioactivities.

Figure 1
Figure 1.1 T.S of leaf through midrib

Figure 3
Figure 3.1 T.S of Midrib Abaxial vascular segment enlarged

Figure 4 .
Figure 4.1 T.S of midrib showing crystal distribution

Figure 6
Figure 6.1 T.S of leaf -Epidermal cells showing -9).Two of the three isolates belong to Ascomycetes whereas Schizophyllum commune belongs to Basidiomycetes.This corroborates with the findings of earlier researchers who reported the dominance of Ascomycetes over Basidiomycetes in the endophytic fungal community (Porras-Alfaro & Bayman, 2011; Wehner et al., 2014).

Figure 7 Figure 8 Figure 9
Figure 7 Phylogenentic tree of ITS gene sequences of Aspergillus niger