Isolation, identification, and susceptibility testing of pathogenic fungi

The isolates of pathogenic fungi were obtained from patients treated in the First Clinic of Intensive Care at the Medical University of Lublin, Poland. The isolation was carried out during routine microbiological screening and surveillance of hospitalized patients. Samples were transported in accordance with the intensive care unit (ICU) protocol (ZSZ procedure no: PM SE/010, 3rd edition, "Transport and collection of diagnostic materials for clinical trials"). Solid medium Sabouraud 2 Chloramphenicol agar (BioMerieux) was used for selective culturing of fungi from samples taken from the patients. Species identification of recovered colonies was performed using commercial chromogenic media Candida Chromogenic LAB-AGAR TM (BioMaxima, BioCORP) and ID 32 C (BioMerieux) tests, using the metabolic profile of individual species for identification. The antifungal susceptibility of the recovered isolates was studied with the microdilution method using the commercial ATB FUNGUS 3 kit (BioMerieux) with automatic reading of the results. For the reference strains of Candida albicans NCPF 3153 and Candida parapsilosis ATCC 22019 determination of the minimal inhibitory concentration (MIC) of amphotericin B (AmB) and fluconazole (FLC) was additionally performed, according to the procedure described in the section “Determination of the antifungal activity of the C1 compound”. The culture and identification of fungal isolates and testing their susceptibility to the standard antifungals were performed in the Laboratory of the Chair and Department of Medical Microbiology, at the Medical University in Lublin, Poland. This laboratory is included in the list of laboratories maintained by the National Chamber of Laboratory Diagnosticians under number 2683 on the list for the Lubelskie Voivodeship.

Determination of the antifungal activity of the C1 compound

The identified isolates were stored at -70°C in cryovials VIABANK (BioMaxima) and used for further studies. Before each experiment, in order to obtain logarithmically growing fungal cells, the strains were precultured in a liquid YPD medium (1% yeast extract, 2% bactopeptone, 2% glucose) in 0.01 mol/l phosphate buffer pH 7.0, with shaking, at 35°C, for 24 h. The antifungal activity of the C1 compound was determined against the reference strains of Candida albicans NCPF 3153, Candida parapsilosis ATCC 22019, Aspergillus niger ATCC 16888, Rhodotorula mucilaginosa ATTC 22273, and Trichophyton rubrum 28188, as well as clinical isolates of Candida species resistant to selected antifungals, including C. krusei, C. albicans, C. glabrata, C. tropicalis, and C. dubliniensisb (the resistance profiles of the reference and clinical isolates are indicated in Table A in supplementary file). The broth microdilution method with identification of the minimal inhibitory concentration (MIC) was employed according to the standard methodological guidelines recommended by the Clinical and Laboratory Standards Institute (CLSI): document M27-A3 and M38-A2 for testing the susceptibility of yeasts and moulds, respectively [17, 18]. The method was modified by addition of 2% glucose to RPMI 1640 medium in order to optimize the fungal growth conditions. To determine the MIC values, an inoculum was prepared with the final density of 0.5 x 10³–2.5 x 10³ cells/ml for yeast and 0.4 x 10⁴–5 x 10⁴ for mold spores, diluted in RPMI 1640 medium, without phenol red and sodium bicarbonate (Sigma-Aldrich, catalog number: R 8755), buffered to pH 7.0 with 0.165 mol/l 3-(N-morpholino) propanesulfonic acid (MOPS) and supplemented with 2% of glucose. To obtain a stock solution, 1 mg of the C1 compound was dissolved in 100 μl of DMSO and further diluted in the culture medium to the concentration of 1 mg/ml. The stock solution was used to obtain twice-concentrated aliquots of the C1 compound in the culture medium on 96-well plates. The fungal inoculum (100 μl) was added to the wells containing 100 μl of two-fold serial the dilutions of the C1 compound, obtaining the final concentrations of the C1 compound ranging from 128 to 0.5 μg/ml. An additional final concentration of 96 μg/ml of C1 was also included in the assays. Some rows of the wells were left for the control fungal cells (no C1) and the medium-only control. The final concentration of DMSO did not exceed 0.5% and was added to the control samples as well. The plates were incubated for 48 h at 35°C or 27°C for the yeasts (Candida spp. and Rhodotorula spp.) and molds (Aspergillus spp. and Trichophyton spp.), respectively. Results were inspected visually and read spectrophotometrically using an E-max Microplate Reader at a wavelength of 600 nm (OD₆₀₀). The concentrations of the compound inhibiting the microbial growth completely after 48 h of culture were assumed as the MIC₁₀₀ values. and those inhibiting the growth by 70% were taken as the MIC₇₀ values (see below). The MIC assays were repeated three times for each strain/species. In one repetition, each concentration of the compound was tested in 4 replicates (wells). The results presented are therefore the average of 12 individual measurements. The MIC₇₀ value was determined by calculating the percentage of the control growth in each replication according to the following equation: (OD₆₀₀ of the treated sample) / (OD₆₀₀ of the untreated sample) x 100. Next, the average value of the percentage of the control growth was calculated. When the average percentage growth of the treated sample relative to the control sample was 30% or lower, the concentration was taken as MIC₇₀ (70% growth inhibition).

The percentage inhibition of fungal growth by the different concentrations of the C1 compound after 24 and 48 h of incubation, in relation to the control, was measured for the reference strains of C. albicans NCPF 3153 and C. parapsilosis ATCC 22019. Cultures were prepared on 96-well plates according to the procedure described for MIC determinations. After 24 and 48 h of culture at 35°C, the optical density was spectrophotometrically determined using an E-max Microplate Reader at a wavelength of 600 nm. The assays were repeated three times for each strain. In one repetition, each concentration of the compound was tested in 4 replicates (wells). The results presented are therefore the average of 12 individual measurements. The data were normalized according to the procedure described for MIC determinations. Basic statistics, one-way analysis of variance (ANOVA), and a post-hoc Tukey test, were performed using StatSoft Statistica 12.5 software.

The minimal fungicidal concentration (MFC) was determined with the plate serial dilution method. Fungal cultures treated for 48 h with the concentrations of the C1 compound ranging from 16 to 256 μg/ml and prepared as described for the MIC determinations were serially diluted and aliquots of 20 μl were inoculated onto the Sabouraud dextrose agar plates. Samples treated with a concentration of the compound at which no colony growth was expected were inoculated on the plates without dilution. After 48 h of incubation at 35°C or 27°C for the yeasts and molds, respectively, the number of colonies was counted. The concentrations at which no colonies or only 1–2 colonies were grown were taken as the MFC values. The MFC assays were repeated three times for each strain/species, and duplicate samples were included in each repeat. The results presented therefore come from 6 individual readings. Two-fold dilutions of the compound were tested (0.5; 1; 2; 4; 8; 16; 32; 64, 128, 256 μg/ml, and additionally 96 μg/ml); hence, the read MFC values were identical in each repetition for a given strain. Therefore, it was not necessary to calculate the average values.

Morphological studies

Morphological observations and measurements were carried out using standard strains of C. albicans (NCPF 3153) and C. parapsilosis (ATCC 22019). For measurements of the cell size, the cultures were treated with the C1 compound at the concentrations of ¼ MIC₇₀ (8 μg/ml for C. parapsilosis and 16 μg/ml for C. albicans) in the culture medium as described for the MIC determinations at the initial inoculum density of 5 x 10³–1 x 10⁴ cells/ml. At the determined time points (24, 48, and 72 h), cell samples were taken, placed on microscope slides, covered with a cover glass, and observed under a bright field optical microscope. A series of images of each slide were taken at a fixed magnification using the Canon A 640 digital camera. The measurements of the short and the long diameter of 200 individual cells in the images were made for each sample and the cell area in μm² (cell size) was estimated according to the formula for the ellipse area (major radius x minor radius x 3.14) using Microsoft Excel software (MS Excel 2010, Microsoft Corporation). The ratio of the long/short cell diameter was also calculated to determine changes in the cell shape. Basic statistics, one-way ANOVA, and a post-hoc Tukey test were performed using StatSoft Statistica 12.5 software. The basic statistics, including the median, 25–75% range of data, and non-outlier and outlier range of data were presented on box and whisker plots or on scatter plots prepared using StatSoft Statistica 12.5 software. Statistically significant differences between the averages of the treated groups in relation to the untreated control were marked with asterisks on the plots.

For induction of hypha formation and observation of morphological changes, Candida cells were cultured in RPMI 1640 medium without glucose enrichment with addition of 20% bovine serum, at 37°C. Control cells and cells treated with the C1 compound at the concentrations of 0.5–8 μg/ml were cultured in 96-well plates for 48 h. After that time, the cells were stained with Calcofluor White (as described below), and slides from each C1 concentration were prepared and observed under a fluorescence and phase-contrast microscope. A series of images was taken of each slide. The number of cells displaying each morphotype was scored, and the percentage of each morphotype was calculated.

Supravital cell staining with fluorochromes

For chitin detection, the cells were stained with Calcofluor White (Sigma-Aldrich, 18909). The stock solution containing Calcofluor White M2R (1 g/l) and Evans Blue (0.5 g/l) was added to the culture suspension in a volume ratio of 1:1. After 5 min of staining in the dark, the cells were centrifuged, washed in PBS buffer, pH 7.4, and placed on the microscopic slides. Freshly prepared slides were examined under a Nikon Labophot 2 fluorescence microscope equipped with a 380–420 nm band-pass blue excitation filter block (V-2A, Nikon), a 430 nm dichromatic mirror, and a 450 nm long-pass barrier filter.

To stain β(1→3) glucan, the cells were stained with a 0.005% Aniline Blue solution (Sigma-Aldrich, 415049) in 1 M glycine, pH 9.5, for 5 min and observed in a drop of the solution using a Nikon Labophot 2 fluorescence microscope equipped with a 330–380 nm band-pass blue excitation filter block (UV-2A, Nikon), a 400 nm dichromatic mirror, and a 420 nm long-pass barrier filter.

Intracellular compartments with low pH were visualized using Acridine Orange, i.e. a metachromatic fluorescent cationic dye, which permeates the cell membrane, intercalates DNA and RNA, and additionally differentiates cell compartments with different pH. The acidic compartments fluoresce bright red, and thus the volume of acidic cellular compartments can be quantified using acridine orange staining [19, 20]. The cells were stained with a water solution of Acridine Orange hydrochloride hydrate (Sigma-Aldrich, 318337) at a final concentration of 1 μg/ml for 20 min. Next, the cells were centrifuged, washed in water, and placed on microscope slides. The microscope was equipped with a 450–490 nm band-pass blue excitation filter block (B-2A, Nikon), a 500 nm dichromatic mirror, and a 515 nm long-pass barrier filter. Images were captured on a Nikon Labophot 2 fluorescence microscope equipped with a Canon Power Shot A 640 digital camera. Candida cells treated with the C1 compound were also checked for fluorescence without any additional fluorochrome staining to exclude background fluorescence that might confound the interpretation of the fluorochrome staining data.

Osmotic resistance test

To test the osmotic resistance of the C1-treated cells, fungal cultures of standard C. albicans and C. parapsilosis strains at the initial inoculum density of 5 x 10³–1 x 10⁴ cells/ml were treated with the C1 compound at the concentration of ¼ MIC₇₀ for 48 h. After the treatment, the cells were centrifuged, washed in PBS buffer, pH 7.4, centrifuged again, and divided into two groups of samples. The first group was resuspended in RPMI 1640 culture medium and the second group in pure water, and incubated for 30 min at 35°C. Control cells (not treated with C1) were prepared in the same way. Following incubation in the culture medium or in water, the cells were centrifuged and slides were prepared. Freshly prepared slides were examined under an optical bright field microscope and a series of images of each slide was taken at a fixed magnification using a Canon A 640 digital camera. Measurements of the short and the long diameter of 200 individual cells in the images were made for each sample and the cell area in μm² (cell size) was estimated according to the formula for the ellipse area (major radius x minor radius x 3.14) using Microsoft Excel software (MS Excel 2010, Microsoft Corporation). Basic statistics, one-way ANOVA, and a post-hoc Tukey test were performed using StatSoft Statistica 12.5 software. The scatter plots presenting the distribution of the data in particular samples were prepared using StatSoft Statistica 12.5 software. Statistically significant differences between the averages of the treated groups in relation to the untreated control were marked with asterisks on the plots.

Interaction of C1 with Calcofluor White

Calcofluor White is a compound that interferes in the polymerization of cell wall molecules. To study the interaction of C1 and Calcofluor White, cultures of standard strains of C. albicans and C. parapsilosis were prepared on 96-well plates according to the procedure described for MIC determinations. In the successive rows of the wells, the fungal cells were treated with Calcofluor White (at the concentrations of 10 and 28 μg/ml), with the C1 compound (at the concentrations of 4, 8, 16, and 32 μg/ml) individually, or with a combination of these substances. After 48 h incubation at 35°C, the OD₆₀₀ was measured using the E-max Microplate Reader. The assays were repeated three times and each sample was tested in 4 replicates (wells) in one repetition. The results presented are therefore the average of 12 individual measurements. Basic statistics, one-way ANOVA, and a post-hoc Tukey test were performed in the StatSoft Statistica 12.5 software. Statistically significant differences between the treatment groups were marked with asterisks on the plots.

Scanning electron microscopy (SEM)

Cells were cultured in RPMI 1640 medium, buffered to pH 7.0 with 0.165 mol/l MOPS, and supplemented with 2% of glucose in Eppendorf tubes for 24 h with shaking at 30°C starting at an initial inoculum density of 5 x 10⁴ cells/ml. There were two groups of samples: the control (no drug added) and samples treated with the C1 compound at a concentration of 32 μg/ml. The cells were harvested by centrifugation at 1000 rpm for 3 min at 4°C and fixed for 24 h in 4°C in a solution containing 4% glutaraldehyde (G5882 Sigma-Aldrich), 0.5% formaldehyde (18814–10 Polyscience), 5 mM CaCl₂, and 0.5 M sorbitol (S1876 Sigma-Aldrich) in 0.1 M cacodylate buffer pH 7.2 (prepared from sodium cacodylate trihydrate 01131–25 Polyscience). Next, the cells were rinsed twice in the cacodylate buffer pH 7.2 and postfixed in a 1% osmium tetroxide solution (75632 Sigma-Aldrich) with 0.5 M sorbitol in 0.1 M cacodylate buffer pH 7.2 for 2 h in 4°C. After washing twice in the cacodylate buffer, cells were dehydrated in a series of ethanol solutions (30%, 50%, 70%) and next in acetone solutions (70%, 90%, 99%) for 15 min. Dehydratation of the cells was continued in anhydrous acetone (2 x 30 min) and next in a desiccator with CaCl₂ for 24 h. The dried samples were mounted on specimen stubs using a double-sided adhesive tape and coated with gold in a vacuum sputter coating system. The coated samples were viewed under a VEGA 3 TESCAN scanning microscope at 30 kV. The whole procedure was repeated 3 times. Representative photographs from the control and C1-treated cells are presented.

The spheroplast lysis assay

Cells were cultured in YPD broth at the initial inoculum density of 5 x 10⁴ cells/ml, for 24 h with shaking at 30ºC. There were two groups of samples: the control (no drug added) and samples treated with the C1 compound at the concentration of 32 μg/ml. The rate of spheroplasts lysis under the enzymatic digestion of the cell walls in hypotonic conditions was assessed according to the method described by Ovalle et al. [21]. After 24 h of culture, cells at the early stationary phase were harvested by centrifugation at 1000 x g for 5 min and washed three times in sterile deionized water. The harvested cells were suspended in TE buffer (50 mM Tris-HCl, 150 mM NaCl, 5 mM EDTA; pH 7.5) to obtain optical density between 0.6 and 0.7. Zymolyase^TM 100 T (AMS Biotechnology), i.e. lyophilized powder containing a mixture of protease and β-glucanase, was dissolved in a 1:1 glycerol/water solution to a concentration of 20 mg/ml and stored at -70°C. The working solution was prepared by diluting the stock solution 1:10 with TE buffer. A 100 μl aliquot of the Zymolyase working solution was added to 2 ml of the cell suspension in TE buffer (optical density between 0.6 and 0.7), vortexed, and kept in a thermostat at 25°C. The samples were vortexed for 30 s before each OD determination (600 nm, 10 min intervals) in the spectrophotometer (Agilent Cary 60 UV-Vis). The experiment was repeated three times with two replicates (n = 6). Basic statistics, multivariate analysis of variance (MANOVA), and a post-hoc Tukey (HSD) test were performed using StatSoft Statistica 12.5 software.

Quantification of ergosterol

Determination of the ergosterol content in the C1-treated cells, in comparison with the control, was performed using the C. albicans standard strain (NCPF 3153), which is susceptible to FLC. To confirm the specificity of the ergosterol quantification method, the amount of this compound was additionally measured in cells treated with FLC, which inhibits ergosterol biosynthesis, and with AmB, which does not affect the synthesis of this compound. Cells at the initial inoculum density of 5 x 10³–1 x 10⁴ cells/ml were cultured in RPMI 1640 medium, without phenol red and sodium bicarbonate (Sigma-Aldrich, catalog number: R 8755), buffered to pH 7.0 with 0.165 mol/l MOPS and enriched with 2% glucose, with addition of the C1 compound at the concentrations of ½ and ¼ MIC₇₀, FLC at the concentration of ½ MIC₇₀, or AmB at the concentration of ½ MIC₁₀₀ (MIC values are indicated in Table A in S1 File), in 2 ml Eppendorf tubes for 24 h with shaking at 35°C. Cells were harvested by centrifugation at 1,700 x g for 5 min at 4°C and washed once with sterile distilled water. The supernatant was carefully drained by setting the tubes at an angle on filter paper. The cell pellet from a few Eppendorf tubes in each treatment was collected to obtain a net wet weight of yeast equal to 200 mg. Total intracellular sterols were extracted and spectrophotometrically measured as described by Breivik and Owades [22] with modifications [23]. The cell pellet was mixed with 3 ml of a 25% potassium hydroxide ethanolic solution (25 g KOH added to 35 ml of sterile deionized water and brought to 100 ml with 100% ethanol, the solution was freshly prepared daily), transferred to borosilicate glass tubes with screw caps, vortex mixed for 1 min, and incubated in a water bath at 85°C for 1.5 h. After cooling to room temperature, total sterols were extracted by adding 3 ml of n-heptane and 1 ml of sterile deionized water and vigorous mixing on a vortex for 3 min. The blank solution was prepared by mixing 3 ml of a 25% potassium hydroxide ethanolic solution, 3 ml of n-heptane, and 1 ml of sterile deionized water. The test and blank tubes were left for 30 min to allow the n-heptane layer to clarify. After this time, the n-heptane layer was carefully collected and diluted fivefold with absolute ethanol. Absorbance was measured at 281.5 and 230 nm against a similarly diluted blank using a Varian Cary 50 UV-Vis Spectrophotometer. The reading at 281.5 nm is the sum of the absorbances of ergosterol and the late sterol intermediate 24(28)-dehydroergosterol (DHE), while the reading at 230 nm is the absorbance of DHE. The content of ergosterol was calculated as a percentage of the wet weight of the cell pellet according to the equations: % ergosterol + % DHE = [(absorbance at 281.5 nm/290) x dilution]/pellet weight, % DHE = [(absorbance at 230 nm/518) x dilution]/pellet weight and % ergosterol = (% ergosterol + % DHE)—% DHE, where 290 and 518 are the E values (in percentages per centimeter) determined for crystalline ergosterol and DHE, respectively.

This experiment was repeated three times with one replication (n = 3). The results are presented as the percentage of ergosterol content in the treatment samples relative to the control sample. The percentage of the control was calculated according to the following equation: (% of ergosterol in wet weight of the treated sample) / (% of ergosterol in wet weight of the untreated sample) x 100. Next, the average value of the percentage of the ergosterol content of the treated samples in relation to the control was calculated. Basic statistics, one-way ANOVA, and a post-hoc Tukey test were performed using StatSoft Statistica 12.5 software. A statistically significant difference between the treated samples and the control sample is marked with an asterisk on the plot.

Cell wall isolation

The cells were cultured at the initial inoculum density of 5 x 10⁴ cells/ml in RPMI 1640 medium pH 7.0 with 0.165 mol/l MOPS and supplemented with 2% of glucose in Eppendorf tubes for 24 h with shaking at 30°C. There were two groups of samples: the control (no drug added) and samples treated with the C1 compound at the concentration of 32 μg/ml. The cell walls were isolated with the method described by Pitarch et al. [24]. Briefly, cells were harvested by centrifugation at 4500 x g for 5 min at 4°C and washed three times with sterile ice-cold water and then twice with an ice-cold lysis buffer (10 mM Tris-HCl, pH 7.4 with a protease inhibitor—1 mM phenylmethylsulfonyl fluoride (PMSF, P7626 Sigma-Aldrich). Cells resuspended in ice-cold lysis buffer (10⁸ cells/μl) were frozen with liquid nitrogen and disintegrated in an alabaster mortar by grinding with a pestle. The cycle of freezing and grinding was carried out until complete cell breakage, verified under a phase-contrast microscope and a posteriori by the lack of colony growth on YPD plates. To remove noncovalently bound proteins and intracellular contaminants, a multi-stage washing procedure was performed. The isolated cell walls were resuspended in 10 ml of the first washing solution (1 mM PMSF in ice-cold water) and centrifuged 10 min at 1000 x g at 4°C. The supernatant was carefully discarded. This step was repeated three more times. A similar procedure was performed with the second (5% NaCl, 1 mM PMSF), third (2% NaCl, 1 mM PMSF) and fourth (1% NaCl, 1 mM PMSF) washing solutions. The isolated cell walls were washed three times with ice-cold sterile water and harvested by centrifugation. Aliquots (100 μl) of the isolated cell walls were poured into freezing tubes and stored in liquid nitrogen until use.

ATR-FTIR spectroscopy

Attenuated total reflection Fourier transform infrared spectroscopy (ATR-FTIR) was used to study the influence of C1 on C. albicans cell wall material. A 20 μl aliquot of the isolated cell walls was sampled on the ZnSe crystal and dried under a N₂ stream. The ATR-FTIR spectra in the range of 4000–900 cm^-1 were measured for the cell walls isolated from C. albicans control and C1–treated cells using a FTIR VERTEX 70 (Bruker Optik GmbH, Germany) spectrometer. Spectral resolution was set at 2 cm^-1, sampling 16 scans per sample, and the MCT detector was used. The software Grams/AI 9.1 Spectroscopy Software (Thermo Fisher Scientific Inc.) was used to carry out baseline correction, vector normalization, and calculation of the reverse second derivatives of spectral values. The experiment was repeated three times and duplicate samples were included in each repeat. Three spectra were measured from each replicate sample. Representative spectra and reverse second derivatives of spectral values of the walls isolated from control cells and those treated with 32 μg/ml of C1 are presented.

Evaluation of cytotoxic activity

The cytotoxicity of the C1 compound was determined in vitro against normal human dermal fibroblasts (NHDF, Lonza, CC-2511, Bazel, Switzerland). The cells were stored in liquid nitrogen in a tissue bank, thawed at 37°C before the experiment, transferred to culture bottles for adherent cultures (Nunclon®) containing Dulbecco’s modified Eagle medium nutrient mixture F-12 HAM (Sigma, D8062), supplemented with 10% heat-inactivated fetal bovine serum and 10 μg/ml of gentamycin, and cultured in an incubator with humidified atmosphere saturated with 5% CO₂ at 37°C for 48 h. The cell suspension obtained by detachment with a 0.25% trypsin-EDTA solution was diluted with the medium described above, pipetted to 96-well plates for adherent cultures (Nunclon®) at the density of 6,500 cells in 200 μl of the medium per well, and cultured for 24 h. Next, the culture medium was gently aspired and prewarmed medium supplemented with the C1 compound was added at the concentrations of 4–512 μg/ml. The cells were further cultured for 48 h, after which the cell viability was determined with the In Vitro Toxicology Assay Kit, MTT based (Sigma-Aldrich, TOX 1), according to the manufacturer’s instructions. The amount of formazan formed was determined spectrophotometrically using an E-max Microplate Reader at a wavelength of 570 nm. Based on these analyses, the concentration leading to 50% inhibition of cell viability (IC₅₀) by the studied compound was estimated. The assays were repeated three times with 8 replicates (wells) for each concentration. The results presented are therefore the average of 24 individual measurements. They are presented as a percentage of the viability of the treated cells in relation to the control cells. The percentage of the viability of the treated cells was calculated according to the following equation: (absorbance at 570 nm of the treated sample) / (average absorbance at 570 nm of the untreated sample) x 100. Next, the average value of the percentage of the cell viability in the treated samples in relation to the control was calculated. Basic statistics, one-way ANOVA, and a post-hoc Tukey test were performed using StatSoft Statistica 12.5 software. Statistically significant differences between the treated samples and the control sample were marked with asterisks on the plot.

The C1 compound exhibits antifungal activity against various fungal species

To determine the MIC of C1 against fungal species and strains, the broth microdilution method was employed according to the standard methodological guidelines recommended by the Clinical and Laboratory Standards Institute (CLSI): document M27-A3 and M38-A2 for testing the susceptibility of yeasts and moulds, respectively. MFC was studied using the plate serial dilution method. The results of these investigations showed that the C1 compound has antifungal activity against various types of standard strains and clinical isolates. Depending on the concentration, it exhibited fungistatic or fungicidal activity (Table 1). The values of the minimal inhibitory concentration inhibiting fungal growth to 100% (MIC₁₀₀) obtained after 48 h of culture varied depending on the strain in the range of 8–96 μg/ml, while the values of the minimal inhibitory concentration inhibiting fungal growth to 70% (MIC₇₀) were lower and ranged from 4 to 64 μg/ml. An advantage of this compound is the fact that it is possible to determine its concentration that completely inhibits the proliferation of the pathogenic fungi and the minimal fungicidal concentration (MFC) at which the growth of colonies is completely eradicated. The MFC values determined for this compound ranged from 32 to 128 μg/ml, and the MFC/MIC₁₀₀ ratio for the tested pathogens was in all cases < 4, indicating that the C1 compound has not only fungistatic but also fungicidal activity. Furthermore, the analyses have shown that the C1 compound has a wide range of antifungal activity against C. albicans and non-albicans species from the Candida genus and against molds, such as Aspergillus and Trichophyton. It also exhibited fungicidal activity against clinical isolates resistant to azoles, with similar MIC and MFC values to those against strains that are sensitive to these antifungals (see Table A in S1 File). Detailed studies of the antifungal activity of the C1 compound were performed on standard C. albicans and C. parapsilosis strains by observing the dynamics of growth inhibition induced by the C1 compound in the two Candida species after 24 and 48 h of treatment (Fig 2). These experiments showed 70% inhibition of C. parapsilosis and C. albicans growth at C1 doses that were by half or two third, respectively, lower than the determined MIC₁₀₀.

Download:

• PPT
  PowerPoint slide
• PNG
  larger image
• TIFF
  original image

Fig 2. Percentage of C. albicans NCPF 3153 and C. parapsilosis ATCC 22019 growth, measured as the OD₆₀₀, induced by the C1 compound in relation to the control.

Yeasts were grown in 96-well plates according to the procedure described for MIC determinations. After 24 and 48 h of culture at 35°C, the optical density was spectrophotometrically determined at a wavelength of 600 nm. The assays were repeated three times for each strain. In one repetition, each concentration of the compound was tested in 4 replicates (n = 12). The percentage of treated samples growth in relation to the control was calculated according to the following equation: (OD₆₀₀ of the treated sample) / (OD₆₀₀ of the untreated sample) x 100. The average percentage values are given along with the standard deviation. Raw data can be found in Tables B and C in S1 File. *—the lowest concentration at which a statistically significant decrease in OD in comparison with the control was noted, as determined by one-way ANOVA and a post-hoc Tukey test. The dotted line indicates 30% growth relative to the control.

https://doi.org/10.1371/journal.pone.0222775.g002

Download:

• PPT
  PowerPoint slide
• PNG
  larger image
• TIFF
  original image

Table 1. Antifungal activity of the C1 compound against standard strains and clinical isolates of pathogenic fungi.

https://doi.org/10.1371/journal.pone.0222775.t001

Morphological analysis revealed that the C1 compound causes phenotypic changes in Candida species

Observations of Candida cells cultured in presence of the C1 compound by microscopy showed that cells exhibited characteristic morphological disturbances occurring at doses significantly lower than the determined MIC values. A detailed analysis of morphological aberrations was performed for the C. albicans NCPF 3153 and C. parapsilosis ATCC 22019 standard strains which differed in cell shape and ability to produce specific morphotypes. Furthermore, these strains vary in their sensitivity to the most effective antifungal agent from the polyene group (AmB); C. albicans is sensitive to AmB (the MIC is equal to 0.5 μg/ml; Table A in S1 File), while C. parapsilosis is not very sensitive to this antifungal (the MIC is equal to 2 μg/ml; Table A in S1 File). To investigate the effect of the C1 compound on the formation of specific morphotypes, the Candida strains were cultured in MOPS-buffered RPMI 1640 medium with the addition of 2% glucose and 20% bovine serum, at 37°C, for 48 h. In this medium, C. albicans, which is a polymorphic fungus, produced different morphological forms, including the yeast form (blastospores), true hyphae, and pseudohyphae. In the control population (no drug added), the hyphal and pseudohyphal morphotypes accounted for approx. 24% of C. albicans cells; 29% were blastospores in the form of rounded single cells, 34% were budding yeast (doublets), approx. 10% were three yeast cells combined together (triplets), and only 3% were short chains of joined cells (Fig 3A). The addition of the C1 compound at a concentration of 0.5 and 1 μg/ml resulted in a reduction of the percentage of hyphae and pseudohyphae produced, down to 3 and 1%, respectively. A C1 concentration of 2 μg/ml completely inhibited formation of these morphotypes. Another distinctive phenotypic change occurring under the influence of increasing concentrations of the C1 compound was the reduction in the percentage of single yeast forms and budding doublet yeasts with a corresponding increase in the formation of multicellular aggregates. Multicellular aggregates appeared at a C1 concentration as low as 0.5 μg/ml, at which small aggregates represented about 22% and big multicellular aggregates accounted for about 6% of all cells in the culture. With an increase in the C1 compound concentration, the number of the big cellular aggregates increased, reaching 44% and 58% of all cells in the culture at C1 concentrations of 2 and 8 μg/ml, respectively. The non-aggregated morphological forms at the C1 concentrations of 2 and 8 μg/ml were reduced to a very low level (Fig 3A).

Download:

• PPT
  PowerPoint slide
• PNG
  larger image
• TIFF
  original image

Fig 3.

Changes in the morphotypes of C. albicans NCPF 3153 (A) and C. parapsilosis ATCC 22019 (B) upon C1 treatment. Candida cells were cultured in RPMI 1640 medium, without glucose enrichment, with addition of 20% bovine serum, at 37°C for 48 h. Control cells were cultured without the drug, and the C1 compound was added to the treatment groups at concentrations ranging from of 0.5–16 μg/ml as indicated. Following treatment, cells were stained with Calcofluor White and images were acquired using a fluorescence microscope. The number of cells displaying each morphotype was recorded and the percentage share was calculated. The total number of cells counted for each sample ranged from 79–300 (see Tables D and E in S1 File for raw data).

https://doi.org/10.1371/journal.pone.0222775.g003

The C. parapsilosis cells growing in the control medium had a cylindrical shape and most were arranged in long chains forming pseudohyphal (Fig 3B). The cells treated with C1 exhibited aberrant morphology, which manifested as a change in the cell shape from cylindrical to rounded, as well as a tendency to flocculate. These phenotypic changes were observed at C1 concentrations as low as 0.5 μg/ml. The percentage of aggregates, both small and big, increased with an increase in C1 concentration. At a concentration of 2 μg/ml, cylindrical cells constituted only 3% and the total share of aggregates of different sizes was about 71%. In the culture treated with C1 at a concentration of 8 μg/ml, there were no cylindrical cells at all. Free ellipsoid cells constituted only 3% of the cell population, and aggregates of rounded cells were a vast majority (Fig 3B).

It was observed that the treatment of Candida cells with C1 resulted in the formation of abnormally large cells, in addition to the altered rounded shape of the cells. The kinetics of the cell size changes was analyzed after 24, 48, and 72 h of culture upon C1 treatment at the concentration ¼ MIC₇₀. The morphometric analysis performed for both Candida species revealed that the size of the cells in the control cultures (without the addition of the drug) did not change statistically significantly on the particular days of their growth. In the case of C. albicans, the average size of the control cells was 17 ± 6.6 μm² after 24 h, 11.7 ± 2.6 μm² after 48 h, and 22.2 ± 6 μm² after 72 h of culture (Fig 4A). There was also no statistically significant increase in the size of the cells 24 h after the start of the culture with the addition of 16 μg/ml of C1 (23.8 ± 20.5 μm²), although a greater variation in the cell size was observed in this group. However, after 48 and 72 h of culture upon the C1 treatment, an increase in the size of many cells was observed, giving an average score of 65.8 ± 55.9 μm² after 48 h and 156.7 ± 103.7 μm² after 72 h (a statistically significant increase in comparison to the control, p<0.05). Due to the high standard deviation, the calculated average cell size does not reflect the actual state, because under the influence of C1, very small cells with a size ranging between 8–12 μm² (probably degenerated cells or empty cell walls) and very large cells with a size of 200–400 μm² appeared, which were not observed in the control conditions. The cell size distribution for C. albicans in the following days after the application of 16 μg/ml C1 is shown in a statistical plot (Fig 4A). Additional analysis was performed to identify the lowest concentration of the C1 compound at which changes in the cell size and shape would occur after 48 h of the treatment. In the case of C. albicans, statistically significant changes in the cell size were already observed at the C1 concentration of 2 μg/ml. The average size of the cells increased with the increasing C1 concentration (Fig 4B).

Download:

• PPT
  PowerPoint slide
• PNG
  larger image
• TIFF
  original image

Fig 4. Cell size and shape changes upon C1 treatment in C. albicans NCPF 3153 and C. parapsilosis ATCC 22019.

Yeast cells were cultured in RPMI 1640 medium, with 2% of glucose at 35°C, with different concentrations of C1. A series of images was taken for each condition under a bright field microscope at a fixed magnification. Two diameters of 200 individual consecutive cells in the microphotographs were measured in each slide and used to estimate cell size. Raw data are presented in Tables F-I in S1 File. The kinetics of the cell size changes during 3 d culture in the presence of the C1 compound at the concentration of ¼ MIC₇₀ is shown in panel A for C. albicans and in panel C for C. parapsilosis. The variance in the size of cells treated with the range of the C1 concentrations for 48 h is shown in panel B for C. albicans and in panel D for C. parapsilosis. Changes in the C. parapsilosis cell shape expressed as the ratio of the long/short cell diameter are shown as the kinetics in the 3 d culture in the presence of the C1 compound at the concentration of ¼ MIC₇₀ (panel E) and for cells treated with the range of the C1 concentrations for 48 h (panel F). The median, 25–75% range of data, and non-outlier and outlier range of data are presented as box and whisker plots or scatter plots. *—statistically significant differences in comparison to the control (p<0.05) as determined by one-way ANOVA and a post-hoc Tukey test.

https://doi.org/10.1371/journal.pone.0222775.g004

In the case of C. parapsilosis, the size of the control cells was 68.1 ± 29.6 μm² after 24 h, 88.4 ± 25.4 μm² after 48 h, and of 72.6 ± 31.5 μm² after 72 h of culture (Fig 4C), and the differences were not statistically significant. The treatment with the C1 compound at the concentration of 8 μg/ml for 24 h resulted in reduction of the mean cell size to 40.9 ± 9.9 μm², while at the longer exposure time the cell size grew rapidly and reached 182.9 ± 97.9 μm² after 48 h and 211.4 ± 173.5 μm² after 72 h (statistically significant differences in comparison to the control, p<0.05). Also, in the case of this species, after a longer time of exposure to C1, a large diversity of cell sizes was observed, i.e. the presence of very small and very large cells. In a subsequent experiment, we determined the lowest C1 concentration at which changes in the C. parapsilosis cell size would occur after 48 h of culture. The results showed a statistically significant increase in the cell size at the concentration of 4 μg/ml (Fig 4D).

In C. parapsilosis, a change in the shape of the cells from cylindrical to rounded was observed, which is numerically shown by calculation of the ratio of the long-to-short cell diameter (Fig 4E). In the control group, the long cell diameter was on average 6 times longer than the short one, but this ratio fell down to about 1 after 24 h of culture in the presence of C1 and remained at a similar level after the prolonged culture, which indicates loss of the characteristic cylindrical shape of the cells and transition to a rounded form. The change in the long-to-short cell diameter ratio (change in the cell shape) was statistically significant already at the C1 concentration of 0.5 μg/ml (Fig 4F).

C1 affects fungal cell wall integrity

The morphotypic analysis of the C1-treated Candida cells stained with Calcofluor White for chitin and Aniline Blue for β(1→3) glucan revealed that the synthesis of these cell wall components was not inhibited, but impaired distribution of these substances was observed (Figs 5A–5I and 6A–6H). Irregular clusters and unusually intense fluorescence of chitin and β(1→3) glucan were visible in many cells, while the new budding cells were deprived of these substances. After Calcofluor White staining of the C1 treated cells, no fluorescence of chitin in the septum separating the new cell from the parental cell was observed in a majority of budding cells. To determine unambiguously the effect of C1 on the formation of the chitinous septum, further observations of this phenomenon under an transmission electron microscope would be necessary. The incorrect polymerization of cell wall components is evidenced by the fact that all C1-treated cells had a spherical shape. The images clearly indicate that the wall of many cells was ruptured and protoplasm was leaking through the cell wall (Figs 5D, 5J, 6G and 6H). It is likely that such protoplasts restore internal cell wall layers composed of chitin and β(1→3) glucan and exhibited intense fluorescence after staining with Aniline Blue and Calcofluor White. Additionally, next to many enlarged cells, there was an adhering empty cell wall (Figs 5C, 5E, 5I, 6D, 6G and 6H). Ruptured cell walls accompanied by protoplast material leaking out of the cell were also visible. Between the cells, there was an amorphous substance probably formed by degraded cells and cell wall residue (Fig 5B–5E, 6C and 6G). The Candida cells treated with the C1 compound were also checked for fluorescence without any additional fluorochrome staining to exclude background fluorescence that might confound the interpretation of the Calcofluor White and Aniline Blue data. The results showed no visible fluorescence under filters used for Calcofluor White, Aniline Blue, and Acridine Orange observations. An example of a picture of the lack of autofluorescence of C. albicans cells treated with C1 is shown in Fig 5R.

Download:

• PPT
  PowerPoint slide
• PNG
  larger image
• TIFF
  original image

Fig 5. Abnormalities of cell walls and intracellular compartments of C. albicans NCPF 3153 upon C1 treatment.

A-E. Aniline Blue staining for β(1→3) glucan. F-I. Calcofluor White staining for chitin. J. Phase contrast microscope image. M-P. Acridine Orange staining for acidic compartments. R. Unstained, C1-treated cells (control for autofluorescence). Red arrows–protoplasts being pushed out by internal turgor pressure; green arrows—defective cell walls. Scale bar = 10 μm. K. Distribution of the size (cell area in μm²) of cells pretreated with the C1 compound for 48 h then exposed to osmotic stress (water for 30 min) in comparison with drug non-treated cells (control cells). Measurements of 200 cells were made for each sample and are presented as scatter plots. Statistically significant differences between the averages of treated groups in relation to the untreated control are marked with asterisks on the plots and were determined by one-way ANOVA and a post-hoc Tukey test. Raw data are shown in Table J in S1 File. L. Growth of cells treated with Calcofluor White and C1 expressed as the final OD₆₀₀ obtained after 48 h at 35°C. The assays were repeated three times with 4 replicates (wells). The results presented are therefore the average of 12 individual measurements. Raw data are provided in Table L in S1 File. *–statistically significant difference between the treatment groups (p<0.05) as determined by one-way ANOVA and a post-hoc Tukey test.

https://doi.org/10.1371/journal.pone.0222775.g005

Download:

• PPT
  PowerPoint slide
• PNG
  larger image
• TIFF
  original image

Fig 6. Abnormalities of cell walls and intracellular compartments of C. parapsilosis ATCC 22019 upon C1 treatment.

A-D. Aniline Blue staining for β(1→3) glucan. E-H. Calcofluor White staining for chitin. K-N. Acridine Orange staining for acidic compartments. Red arrows–protoplasts being pushed out by internal turgor pressure; green arrows—defective cell walls; yellow arrows–defective β(1→3) glucan and chitin deposition. Scale bar = 10 μm. I. Distribution of the size (cell area in μm²) of cells pretreated with the C1 compound for 48 h then exposed to osmotic stress (water for 30 min) in comparison with drug non-treated cells (control cells). Measurements of 200 cells were made for each sample and are presented as scatter plots. Statistically significant differences between the averages of treated groups in relation to the untreated control are marked with asterisks on the plots and were determined by one-way ANOVA and a post-hoc Tukey test. Raw data are provided in Table K in S1 File. J. Growth of cells treated with Calcofluor White and C1 expressed as the final OD₆₀₀ obtained after 48 h at 35°C. Assays were repeated three times with 4 replicates (wells). Results presented are therefore the average of 12 individual measurements. Raw data are provided in Table M in S1 File. *–statistically significant difference between the treatment groups (p<0.05) as determined by one-way ANOVA and a post-hoc Tukey test.

https://doi.org/10.1371/journal.pone.0222775.g006

Multicellular aggregates (Fig 6B and 6F) can form as a result of impaired cytokinesis or as a result of flocculation. Studies carried out using SEM showed that the wall of untreated cells was smooth and regularly covered the yeast and hyphal morphotypes (Fig 7A). In the C1 treated cells (32 μg/ml for 24 h), abnormalities in the structure of the cell walls were observed, such as an irregular wall surface, and cracking and shedding of wall material (Fig 7B and 7C). The residue from degraded cell walls appeared to form an amorphous substance that stuck together numerous cells to form multicellular aggregates (Fig 7B and 7C).

Download:

• PPT
  PowerPoint slide
• PNG
  larger image
• TIFF
  original image

Fig 7. Changes in C. albicans NCPF 3153 cell wall integrity under C1 treatment.

A-C. Scanning electron micrographs of C. albicans control (no drug added) (A) and C1-treated (32 μg/ml) cells (B, C). Images are representative of 3 independent preparations of each sample. Scale bars = 10 μm. D. The rate of C. albicans NCPF 3153 spheroplast lysis, as indicated by the decrease in OD₆₀₀, under enzymatic digestion of the cell wall in untreated (control) and C1-treated cells (32 μg/ml). The experiment was repeated three times with two replicates (n = 6) and the average values with standard deviation are presented on the plot. *—statistically significant differences between the control and C1–treated cells as determined by multivariate analysis of variance (MANOVA), and a post-hoc Tukey (HSD) test. Raw data are provided in Table N in S1 File.

https://doi.org/10.1371/journal.pone.0222775.g007

The reduction of cell wall integrity was also demonstrated by the reduced osmotic resistance of cells treated with the C1 compound. The control cells of both tested Candida species cultured in RPMI 1640 medium for 48 h and then placed in water for 30 min showed no statistically significant increase in their size (Figs 5K and 6I), indicating that the osmotic influx of water into the cells was balanced by a properly polymerized wall. In contrast, cells grown in the presence of C1 at a concentration of ¼ MIC₇₀ for 48 h and then transferred to pure water for 30 min were characterized by a rapid increase in their size caused by an osmotic influx of water into their interior, which was not prevented by walls with compromised integrity. The average size of C. albicans cells affected by the C1 treatment increased to 280.1 ± 246.5 μm² after 30 min incubation in water, while cells left in the medium maintained an average size of 65.8 ± 56 μm² (Fig 5K). In the case of C. parapsilosis pretreated with C1, the cell size increased to 350.2 ± 156.5 μm² during 30 min of incubation in water, whereas the size of cells left in the culture medium remained at the level of 189.6 ± 99.6 μm² (Fig 6I). Extremely large cells, reaching 500–700 μm², as well as cells with extremely small sizes of approx. 3–5 μm², which were probably empty walls or cell fragments, were visible in the hypoosmotic stress conditions. Some of the C1-pretreated cells kept in water swelled to enormous sizes, but did not burst immediately, which indicates that some of the cell wall layers were preserved, although with compromised integrity. On the other hand, the disrupted cell wall integrity caused swelling and ultimately cell lysis due to turgor pressure in many cells.

To confirm that the cell wall biogenesis was affected by the C1 compound, the interaction of C1 with Calcofluor White, which disrupts the polymerization of the fungal cell wall, was determined. An antifungal synergistic interaction was observed for these substances. Calcofluor White when applied individually at a concentration of 28 μg/ml did not significantly affect the growth of the cells of both Candida species, while the combined application with the C1 compound potentiated its antifungal activity by about 43% in C. albicans (Fig 5L) and by about 23% in C. parapsilosis (Fig 6J). Based on the results of this experiment, it can be concluded that fungal cells treated with the C1 compound exhibited cell wall defects, with enhanced sensitivity of such cells to compounds that interfere with polymerization of the cell wall components (Calcofluor White).

To determine whether the C1 compound affected cell wall integrity, an assay of the rate of spheroplast lysis during enzymatic digestion of the cell walls was performed. Untreated (control) cells and C1-treated (32μg/ml for 24 h) cells of C. albicans subjected to the action of the glucanase-protease mixture exhibited different rates of spheroplsts lysis in hypotonic conditions (Fig 7D). C1-treated cells were more sensitive to the action of the wall-digesting enzymes, as shown by the faster decrease in the OD₆₀₀ in comparison to the untreated cells (Fig 7D). A statistically significant difference between the OD₆₀₀ of the C1-treated and control cells was recorded after 20 min of enzymatic digestion and was maintained until the 60^th minute of the experiment. The results of this experiment confirmed the impaired integrity of C. albicans cells growing in the presence of the C1 compound.

C1 causes disorders in intracellular compartments

Acridine Orange is a substance that fluoresces in red-orange color at low pH (2–3) and in green at pH ≥ 5. This was used to highlight intracellular compartments with low pH. In the control cells, orange-red fluorescence was observed only in the vacuoles. In C. albicans, each blastoconidium contained one regular vacuole which occupied about ¼ of the cell volume (Fig 5M), while the cylindrical cells of C. parapsilosis usually had two small regular vacuoles (Fig 6K). In contrast, severe disturbances in intracellular acidic compartments were observed in cells treated with the C1 compound at a concentration of ¼ MIC₇₀. In many cells, a red-orange color spread throughout the whole cytoplasm. In the other groups of cells, there were multiple vacuoles with different sizes and irregular shapes, occupying a larger area of the cytoplasm than in the control cells (Figs 5N–5P and 6L–6N). Such vacuolar disorders may indicate the process of autophagy occurring in cells with impaired wall biogenesis. In many cells, this staining revealed breaks in cell walls and protoplasts being pushed out by internal turgor pressure (Figs 5P and 6N). In cultures treated with the C1 compound for 48 h, there was also a red-orange fluorescent amorphous extracellular substance composed of degraded cells and remnants of the cell walls (Fig 6M and 6N), which was absent in the control cultures (Fig 6K).

The C1 compound does not affect the ergosterol level

Because the mechanism of the antifungal activity of drugs from the azole group involves inhibition of the ergosterol biosynthesis pathway, it was checked whether the C1 compound (a 1,3,4-thiadiazole) caused a decrease in the level of ergosterol in fungal cells. Treatment of C. albicans with the C1 compound, even at high concentrations (16 and 32 μg/ml), did not reduce the cell ergosterol content in comparison with the control cells (Fig 8). For additional verification of the effectiveness of the applied method for determination of the ergosterol level, an experiment was performed in which C. albicans cells were treated with FLC and AmB, whose mechanisms of antifungal activity are known. In the case of FLC, which inhibits the activity of the enzyme in the ergosterol biosynthesis pathway, a significant reduction in the ergosterol content was found compared with the control. In turn, no reduction in the ergosterol level was induced by AmB, although the compound causes loss of integrity of the fungal cell membrane (Fig 8). These results lead to a conclusion that the mechanism of the antifungal activity of the C1 compound does not rely on inhibition of ergosterol biosynthesis.

Download:

• PPT
  PowerPoint slide
• PNG
  larger image
• TIFF
  original image

Fig 8. Ergosterol level expressed as the control percentage in C. albicans NCPF 3153 cells treated with fluconazole (FLC), amphotericin B (AmB), and the C1 compound.

C. albicans cells were cultured in RPMI 1640 medium, without phenol red and sodium bicarbonate, buffered to pH 7.0 with 0.165 mol/l MOPS and enriched with 2% glucose, with addition of the C1 compound at the concentrations of ½ and ¼ MIC₇₀, FLC at the concentration of ½ MIC₇₀, or AmB at the concentration of ½ MIC₁₀₀, for 24 h with shaking at 35°C. The ergosterol level was measured with the spectroscopic method. The average values from three repetitions are presented. The results are presented as the percentage of ergosterol content in the treatment samples relative to the control sample. The percentage of the control was calculated according to the following equation: (% of ergosterol in wet weight of the treated sample) / (% of ergosterol in wet weight of the untreated sample) x 100. Next, the average value of the percentage of the ergosterol content of the treated samples in relation to the control was calculated. Error bars represent the standard deviation. Raw data are presented in Table O in S1 File. *–statistically significant difference in comparison to the control (p<0.05) as determined by one-way ANOVA and post-hoc Tukey test.

https://doi.org/10.1371/journal.pone.0222775.g008

ATR-FTIR analysis shows that the C1 compound causes changes in the cell wall of C. albicans

The ATR-FTIR spectra of cell walls isolated from C. albicans cells, both the control and those treated with the C1 compound at the concentration of 32 μg/ml, are shown in Fig 9A–9C. Spectral differences can be better appraised by inspecting the reverse second derivative of the mean of the FTIR absorption spectra, as they help to resolve the problem of the overlapping components of the IR absorption bands. The reverse second derivatives of the spectra, corresponding to the regions defined above, are shown in Fig 9A–9C. The comparison of the reverse second derivatives of the spectra clearly indicates that the cell walls isolated from C1-treated C. albicans cells exhibit some important spectral modifications in comparison with the walls from the control cell. The spectral assignments were performed based on previously published data as indicated in Table 2.

Download:

• PPT
  PowerPoint slide
• PNG
  larger image
• TIFF
  original image

Fig 9. ATR-FTIR spectra of intact C. albicans control cells and cells treated for 24 h with the C1 compound at the concentration of 32 μg/ml.

A. ATR-FTIR spectra in the region from 3000–2600 cm^-1. B. Spectra in the region from 1800–1200 cm^-1. C. Spectra in the region of 1200–800 cm^-1. a-c: reverse second derivatives of spectra presented in A-C. The experiment was repeated three times and duplicate samples were included in each repeat. From each replicate sample three spectra were measured. A representative spectra and the reverse second derivatives of spectral values of the cell walls isolated from control cells and from cells treated with 32 μg/ml of C1 are presented.

https://doi.org/10.1371/journal.pone.0222775.g009

Download:

• PPT
  PowerPoint slide
• PNG
  larger image
• TIFF
  original image

Table 2. Wavenumbers (cm^-1) and assignments of ATR-FTIR bands for C. albicans control and C1 (32 μg/ml)-treated cells; υ stretching, δ deformation, τ bending.

https://doi.org/10.1371/journal.pone.0222775.t002

In the region of wavenumbers from 3000 to 2700 cm⁻¹ (Fig 9A, a) bands characteristic for yeast wall polysaccharides were recorded. The bands centered at 2918 cm⁻¹ and 2848 cm^-1 can be ascribed to asymmetric and symmetric vibrations of CH₂ groups, respectively, in β-glucan and chitin molecules [25, 26]. The bands at 2959 cm⁻¹ and 2873 cm⁻¹ reflect the asymmetric and symmetric vibrations of CH₃ groups, respectively, in chitin molecules [25]. The band at 2892 cm⁻¹ indicate the stretching vibrations of C-H bindings in polysaccharides [27, 28]. In the described region, no spectral shifts were observed in the walls isolated from C1-treated cells compared to the walls from the control cells. The only noticeable change was the widening of a profile of the band with a maximum at 2918 cm⁻¹_. However, a higher intensity of the bands related to β-glucan and chitin was observed in the C1-treated cells in comparison to the control cells. This result may indicate a higher content of β-glucan and chitin in C. albicans cells growing upon the C1 compound.

In the wavenumbers from 1800 to 1500 cm⁻¹ (Fig 9B, b), the amide I and amide II bands are the two most prominent vibrational bands of the protein backbone and the most sensitive spectral region in the protein secondary structure. Similarly, the amide I and II bands are characteristic for chitin molecules [25]. The applied in the present work procedure of isolation of the yeast cell walls retains covalently bound proteins. Therefore, the observed amide bands reflect the vibrations of the bonds present in the chitin as well as in the wall proteins. When comparing the spectrum of cell walls isolated from control cells and treated with C1, No spectral shifts were observed between the amide I bands (1655 cm⁻¹, 1633 cm⁻¹), whereas in the amide II bands the change of the peak ratio 1550/1542 cm⁻¹was observed. The band of amide III was found in both samples at 1313 cm⁻¹, but in the C1-treated cells a new band at 1296 cm⁻¹ appeared. Similarly, the band characteristic for δ N-H vibrations was recorded at 1252 cm⁻¹ in both samples, but in the C1-treated cells an additional peak at 1231 cm⁻¹ appeared. According to the literature, the spectral region of 1250–1230 cm⁻¹ can also be related to the antisymmetric stretching of the double bond P = O in the phosphomannans of N-mannans. Phosphomannan is fairly abundant in many Candida strains [35, 36]. A detailed interpretation of these changes requires further research, perhaps starting with the removal of covalently bound proteins from the isolated cell wall material to interpret whether the observed changes concern the proteins or chitin.

The most pronounced changes in the C1-treated cells in comparison to the control cells were observed in the polysaccharide absorption region (1200 to 800 cm^-1) of the FTIR spectra (Fig 9C, c). The spectral shifts towards higher frequencies were observed for the bands related to β(1→3) glucan: the band centered at 1155 cm^-1 in the walls of control cells was shifted to 1159 cm^-1 in the walls of C1-treated cells. Similarly, the band related to β(1→6) glucan, centered in the control cells at 996 cm^-1 was shifted to 998 cm^-1 in the cells upon C1 treatment. These spectral shifts may be related to weakened interactions between cell wall molecules to which they are assigned. In contrast, the band related to mannans centered in the control C. albicans cells at 1042 cm^-1 was shifted by 2 cm^-1 towards lower frequencies in the C1-treated cells, which may be related to stronger interactions between these molecules. A significant increase in the absorption intensity of bands related to mannans (1042/1040 cm^-1 and 963 cm^-1) in the C1-treated cells was also observed. Comparing the FTIR spectra of C1-treated cells with the spectra of control cells, the disappearance of a two glucan-related bands was also observed (1018 cm^-1 and 936 cm^-1). However, in the 925–800 cm^-1 region which provides information about the mannan and total glucan content, increased absorbance of the samples isolated from C1-treated cells in comparison to the control cells was recorded.

The C1 compound is not toxic to human cells

The cytotoxicity of the C1 compound was assessed in vitro in normal human dermal fibroblasts (NHDF). The method of spectrophotometric determination of the amount of MTT reduction product after 72 h of culture revealed no significant decrease in the viability of the C1-treated cells, up to a concentration of 256 μg/ml, in comparison with the control cells (Fig 10). There were also no morphological disturbances in the C1-treated cells for these concentrations. Inhibition of cell viability to the level of 64.3 ± 12.6% of the control group was observed at the C1 concentration of 512 μg/ml. This C1 concentration can therefore be described as a dose inhibiting cell viability by 50% (IC₅₀). The therapeutic index (IC₅₀/MIC₁₀₀) ranged from 5.3 to 64, depending on the fungal strain.

Download:

• PPT
  PowerPoint slide
• PNG
  larger image
• TIFF
  original image

Fig 10. Viability of normal human dermal fibroblasts (NHDF) upon C1 treatment.

The NHDF cells (Lonza, CC-2511, Bazel, Switzerland) were cultured in Dulbecco’s modified Eagle medium nutrient mixture F-12 HAM, supplemented with 10% fetal bovine serum in an incubator with humidified atmosphere saturated with 5% CO₂ at 37ºC, for 96 h. The treatment groups were cultured in the presence of C1 compound at the concentrations of 4–512 μg/ml. cell viability was measured spectrophotometrically using the MTT assay and expressed as a percentage of the control. The assays were repeated three times with 8 replicates (wells) for each concentration. The results presented are therefore the average of 24 individual measurements. Error bars represent the standard deviation. Raw data are presented in Tables P and R in S1 File. Statistically significant differences between the treated samples and the control sample were marked with asterisks on the plot and were determined by one-way ANOVA and a post-hoc Tukey test.

https://doi.org/10.1371/journal.pone.0222775.g010