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Directed Partial Correlation: Inferring Large-Scale Gene Regulatory Network through Induced Topology Disruptions

Figure 1

DPC for large-scale transcriptional regulatory network inference.

(a) DPC detects network topology changes with the addition of a gene, the inclusion of a transcription factor should lead to dramatic changes of the connectivity of its downstream targets, (b) module discovery in the large-scale DPC network by biclustering the network adjacency matrix, (c) functional analysis of the network modules reveals putative transcription factors active under the biological condition.

Figure 1

doi: https://doi.org/10.1371/journal.pone.0016835.g001