Robustness of Lorenz-Mie microscopy against defects in illumination

Lorenz-Mie analysis of colloidal spheres’ holograms has been reported to achieve remarkable resolution not only for the spheres’ three-dimensional positions, but also for their sizes and refractive indexes. Here we apply numerical modeling to establish limits on the instrumental resolution for tracking and characterizing individual colloidal spheres with Lorenz-Mie microscopy. © 2013 Optical Society of America OCIS codes: (090.1760) Computer holography; (180.6900) Three-dimensional microscopy; (290.5850) Scattering, particles. References and links 1. J. Sheng, E. Malkiel, and J. Katz, “Digital holographic microscope for measuring three-dimensional particle distributions and motions,” Appl. Opt. 45, 3893–3901 (2006). 2. S.-H. Lee and D. G. Grier, “Holographic microscopy of holographically trapped three-dimensional structures,” Opt. Express 15, 1505–1512 (2007). 3. C. F. Bohren and D. R. Huffman, Absorption and Scattering of Light by Small Particles (Wiley Interscience, New York, 1983). 4. S.-H. Lee, Y. Roichman, G.-R. Yi, S.-H. Kim, S.-M. Yang, A. van Blaaderen, P. van Oostrum, and D. G. Grier, “Characterizing and tracking single colloidal particles with video holographic microscopy,” Opt. Express 15, 18,275–18,282 (2007). 5. T. Colomb, E. Cuche, F. Charrière, J. Kühn, N. Aspert, F. Montfort, P. Marquet, and C. Depeursinge, “Automatic procedure for aberration compensation in digital holographic microscopy and applications to speciment shape compensation,” Appl. Opt. 45, 851–863 (2006). 6. J. Garcia-Sucerquia, W. Xu, S. K. Jericho, P. Klages, M. H. Jericho, and H. J. Kreuzer, “Digital in-line holographic microscopy,” Appl. Opt. 45, 836–850 (2006). 7. D. G. Abdelsalam, B. J. Baek, and D. Kim, “Influence of the collimation of the reference wave in off-axis digital holography,” Optik 123, 1469–1473 (2012). 8. U. Schnars and W. P. O. Jüptner, “Digital recording and reconstruction of holograms,” Meas. Sci. Tech. 13, R85–R101 (2002). 9. J. H. Milgram and W. C. Li, “Computational reconstruction of images from holograms,” Appl. Opt. 41, 853–864 (2002). 10. B. J. Thompson, “Holographic particle sizing techniques,” J. Phys. E: Sci. Instru. 7, 781–788 (1974). 11. S. Soontaranon, J. Widjaja, and T. Asakura, “Improved holographic particle sizing by using absolute values of the wavelet transform,” Opt. Commun. 240, 253–260 (2004). 12. S. L. Pu, D. Allano, B. Patte-Rouland, M. Malek, D. Lebrun, and K. F. Cen, “Particle field characterization by digital in-line holography: 3D location and sizing,” Experiments in Fluids 39, 1–9 (2005). 13. F. C. Cheong, S. Duarte, S.-H. Lee, and D. G. Grier, “Holographic microrheology of polysaccharides from Streptococcus mutans biofilms,” Rheol. Acta 48, 109–115 (2009). 14. F. C. Cheong, B. Sun, R. Dreyfus, J. Amato-Grill, K. Xiao, L. Dixon, and D. G. Grier, “Flow visualization and flow cytometry with holographic video microscopy,” Opt. Express 17, 13,071–13,079 (2009). 15. F. C. Cheong, B. J. Krishnatreya, and D. G. Grier, “Strategies for three-dimensional particle tracking with holographic video microscopy,” Opt. Express 18, 13,563–13,573 (2010). 16. L. Dixon, F. C. Cheong, and D. G. Grier, “Holographic particle-streak velocimetry,” Opt. Express 19, 4393–4398 (2011). 17. F. C. Cheong, K. Xiao, D. J. Pine, and D. G. Grier, “Holographic characterization of individual colloidal spheres’ porosities,” Soft Matter 7, 6816–6819 (2011). 18. H. Shpaisman, B. J. Krishnatreya, and D. G. Grier, “Holographic microrefractometer,” Appl. Phys. Lett. 101, 091102 (2012). 19. J. A. Lock and G. Gouesbet, “Generalized Lorenz-Mie theory and applications,” J. Quant. Spectr. Rad. Trans. 110, 800–807 (2009). 20. G. Gouesbet, “T-matrix fomulationand generalized Lorenz-Mie theories in spherical coordinates,” Opt. Commun. 283, 517–521 (2010). 21. Y. Roichman, B. Sun, A. Stolarski, and D. G. Grier, “Influence of non-conservative optical forces on the dynamics of optically trapped colloidal spheres: The fountain of probability,” Phys. Rev. Lett. 101, 128301 (2008). 22. B. Sun, J. Lin, E. Darby, A. Y. Grosberg, and D. G. Grier, “Brownian vortexes,” Phys. Rev. E 80, 010401(R) (2009).

The benefits of Lorenz-Mie microscopy derive not only from the quantity of particle-resolved information it yields, but also from the high precision claimed for each of the extracted parameters [4].Tracking resolution has been verified independently by analyzing the measured trajectories of freely diffusing colloidal spheres [4,14,15].These measurements confirm that the resolution for locating a sphere's center can exceed 1 nanometer in the plane and 10 nanometers axially over ranges extending to hundreds of micrometers.Numerical uncertainties in the fit values for colloidal spheres' radii and refractive indexes similarly suggest part-per-thousand resolution in these quantities as well [4,14,18].These latter estimates have not been verified independently, however, because no other methods exist to measure the size and refractive index of individual colloidal spheres in situ and with such high resolution.
Here, we establish limits on the tracking and characterization resolution of Lorenz-Mie microscopy by numerically modeling the influence of non-ideal illumination conditions on measured outcomes.The standard analysis [4] treats the incident illumination as a plane wave propagating along the optical axis.Departures from this model in a practical implementation might reasonably be expected to degrade performance.We therefore assess through simulations how uncompensated curvature and tilt of the illuminating beam's wavefronts affect extracted values for particle position, size and refractive index obtained in real-world implementations.
An in-line hologram is created when light scattered by an object interferes with the remainder of the illuminating beam, as shown in Fig. 1.In our implementation, the interference pattern is magnified by a conventional microscope before being recorded with a video camera.Each snapshot in the resulting video stream records the intensity at position r in the microscope's focal plane due to the superposition of the time-averaged incident electric field, E 0 (r), and the field E s (r − r p ) scattered by an object centered at position r p .Assuming the object to be small compared with the typical length scale for variations in the illumination, the scattered field may be approximated as where the scattering function f(kr) describes the outgoing wave that is created by illuminating the particle with the incident wave.The scattering function may be expressed in generalized Lorenz-Mie theory as a series expansion [19,20] in the vector spherical harmonics, M emn (kr), M omn (kr), N emn (kr) and N omn (kr) [3].The expansion coefficients r mn and s mn depend on the structure of the illuminating beam and the properties of the scatterer.For the special case of scattering by a sphere, they reduce to [20] where α n (ka p , n p /n m ) and β n (ka p , n p /n m ) are the familiar Lorenz-Mie coefficients [3] for scattering of a plane wave by a sphere.These, in turn, depend on the sphere's radius a p , and its complex refractive index, n p , relative to that of the medium n m .The transverse electric (TE) and transverse magnetic (TM) beam shape coefficients, g m n,TE and g m n,TM , account for the structure of the incident illumination.Equations ( 4) and ( 5) are the complex conjugate of the expressions in Ref. [20] because here we assume a time dependence exp(−iωt).
Previous implementations of Lorenz-Mie microscopy [4,14,15] have treated the incident field as a linearly polarized plane wave, E 0 (r) = E 0 exp(ikz) x, propagating precisely along the optical axis, for which only the beam shape coefficients with m = ±1 differ from zero and are given by −ig 1 n,TE = ig −1 n,TE = g ±1 n,TM = 1/2.This plane-wave approximation also justifies normalizing the measured hologram by the background intensity I 0 (r) = |E 0 (r)| 2 to suppress artifacts due to extraneous scattering centers in the optical train [4].The normalized hologram then may be fit to the simplified expression to obtain estimates for the particle's position r p , its radius a p , and its refractive index, n p .The phenomenological factor α in Eq. ( 6) is intended to account for diffuse scattering due to surface roughness and for variations in illumination.It typically has values in the range 0.5 < α 1.
In the present study, we assess discrepancies in the estimates for r p , a p and n p that arise when the plane-wave approximation, Eq. ( 6), is used to interpret holograms that are formed with more realistic models for the incident illumination.Specifically, we identify errors arising from divergence and tilt in the illuminating beam.These simulations establish limits on systematic errors for these parameters that can be expected in practical implementations.Under typical experimental conditions, with divergence angles smaller than 1 mrad and tilt angles less than 10 mrad, the resulting errors are found to be an order of magnitude smaller than numerical uncertainties in the fit parameters [4,14].From this we conclude that other factors have a more substantial influence on measurement errors in Lorenz-Mie microscopy and that the analysis technique is robust against this class of illumination defects.

Influence of beam divergence
To study the effects of diverging illumination, we model the incident light as a Gaussian beam of vacuum wavelength λ and wave number k = 2πn m /λ propagating along +ẑ through a medium of refractive index n m .Rather than being collimated as in Fig. 1(a), the beam diverges from a focus of half-width w 0 at a height z 0 above the focal plane of the microscope, as shown in Fig. 1(b).Its electric field is then given in the paraxial approximation by Equations ( 7) and ( 8) accurately describe a weakly divergent beam with kw 0 π.Assuming that the particle is centered on the optical axis at height z p above the focal plane, the beam shape coefficients are [19] We use Eqs.( 7) through ( 9) as inputs to Eqs. ( 1) through (3) to compute simulated holograms of spherical particles with specified radii and refractive indexes at specified heights above the center of the focal plane.We then use Eq. ( 6) to extract estimates āp , np and zp for each particle's characteristics and position under the plane-wave approximation.The differences ∆a p = āp − a p , ∆n p = np − n p , and ∆z p = zp − z p represent the errors incurred by fitting the data with a simplified model.Typical results for the relative errors are plotted in Fig. 2 as a function of the beam divergence angle  The parameters chosen for these simulations are intended to mimic the conditions in recently published experiments [21,22] on micrometer-diameter colloidal silica spheres in water with a p = 0.75 µm, n p = 1.5, and z p = 13.5 µm in a medium with n m = 1.33 at λ = 640 nm.Taking the position of the illuminating laser's output coupler to be the center of curvature, these experiments have z 0 = 10 cm and Ω = 1 mrad, using the manufacturer's specification for beam divergence.The corresponding simulations yield relative discrepancies ∆a p /a p ≤ 10 −5 , ∆n p /n p ≤ 10 −4 and ∆z p /z p ≤ 10 −4 .This is at least one order of magnitude better than the 1 nm resolution reported for a p , the 10 nm resolution reported for z p and the part-per-thousand resolution claimed for n p [21,22].
The data in Fig. 2 suggest that divergence-induced errors scale as 1/z 0 when the source is positioned beyond the Rayleigh range z R = 1 2 kw 2 0 , and are maximized at z 0 = z R .Even in this worst-case configuration, the estimated error is smaller than the claimed resolution for Ω ≤ 2 mrad, which is a reasonable value for a well-collimated beam.

Influence of beam inclination
We now study the influence of tilted illumination.In this case, the incident light is a plane wave with wave vector k that makes an angle θ with respect to the ẑ axis as shown in Fig. 1(c).The axis of inclination is chosen to maximize rotation of the polarization vector ε, thereby maximizing the influence of the beam's inclination.Treating the incident beam as a plane wave is justified by the results of the previous section.The incident field then has the form The scattered field then is given by the plane-wave scattering function Eq. ( 3) rotated by an angle θ about the particle position, around the direction n = ẑ × k/ |ẑ × k|.We therefore rewrite the scattered field as E s (r) = e i k •r p f n(k (r − r p )), in terms of the scattered field that is rotated by about the center of the particle by the rotation matrix R n(θ ).
As in the previous section, we use Eqs.( 11) and ( 12) as inputs to Eq. ( 1) as a basis for computing simulated holograms of spherical particles.These holograms are then fit to Eq. ( 6) to obtain the estimated parameters āp , np and zp .
Figure 3 shows the relative discrepancies for the radius, index of refraction and axial position for a particle with a p = 0.75 µm and n p = 1.5 in a medium with n m = 1.33 as a function of the tilt angle of the laser for different values of the axial position z p .Whereas the errors due to divergence plotted in Fig. 2 vary smoothly with wavefront curvature, those due to tilt feature discrete jumps.This is because inclination distorts a hologram's circular interference fringes into ellipses, thereby breaking the radial symmetry implicit in the fitting procedure.Jumps in Fig. 3 reflect changes in the best circularly symmetric fit with increasing distortion.
Even after accounting for ellipticity in the inclined images, the relative discrepancy in all fit parameters is less than a part per thousand for tilt angles smaller than 1 • (17 mrad) over the experimentally accessible range of the axial position.This falls within the previously estimated range of errors, and confirms that inclination of the illumination is not the dominant source of error in Lorenz-Mie microscopy.Local inclination due to divergent illumination similarly causes negligible offsets for particles located off the optical axis, at least for experimentally relevant values of the beam divergence.
Although divergence and tilt do not appreciably influence the resolution of Lorenz-Mie tracking and characterization, they do introduce systematic correlations between the estimates for the in-plane and axial coordinates so that xp = xp (z p ) and ȳp = ȳp (z p ).Such correlations may be ignored in conventional microscopy because of the comparatively small depth of focus.They become apparent, however, over the large axial range covered by holographic microscopy.In measurements of positional fluctuations, for example, the apparent in-plane fluctuations will be augmented by a proportion of axial fluctuations.Neither divergence nor tilt causes a measurable dependence of the apparent axial position, zp on the in-plane coordinates, x p and y p in the experimentally relevant range of parameters.Consequently, the correlation may be removed by subtracting off linear trends [21,22].
The observed robustness of Lorenz-Mie microscopy against errors in optical alignment leaves open the question of the technique's ultimate resolution.The principal underlying approximation, invoked in Eq. ( 6), involves normalizing the recorded hologram I(r) with an estimate I 0 (r) for the background illumination.Correlated artifacts introduced by departures from ideal normalization can influence fits to Eq. ( 6).Equation ( 6), moreover, does not account for phase disorder in the illumination, which may introduce additional correlated artifacts.Finally, issues such as the signal-to-noise ratio of the recording, the linewidth of the source and the coherence length of the illumination have yet to be considered.The present study thus adds support to the claimed resolution of Lorenz-Mie microscopy while hinting that substantial additional gains may yet be achieved.

Fig. 1 .
Fig. 1.Schematic representation of image formation by in-line holography.(a) Ideal configuration, with scatterer at height z p above the imaging plane.(b) Diverging illumination.(c) Inclined illumination.Grayscale images are computed holograms illustrating the influence of illumination defects.

Fig. 2 .
Fig. 2. Relative errors in (a) radius a p , (b) refractive index n p and (c) axial position z p as a function of the wavefront radius z 0 for various values of the divergence angle Ω.

Fig. 3 .
Fig. 3. Relative errors in (a) radius a p , (b) refractive index n p and (c) axial position z p as a function of angle of inclination of the illumination.