Strain identifier
BacDive ID: 6005
Type strain: 
Species: Cobetia marina
Strain Designation: A 140
Strain history: CIP <- 1974, M. Véron, Paris, France <- P. Baumann, Univ. Hawaii, USA: strain 140, Pseudomonas marina
NCBI tax ID(s): 28258 (species)
General
@ref: 12717
BacDive-ID: 6005
DSM-Number: 50416
keywords: Bacteria, mesophilic
description: Cobetia marina A 140 is a mesophilic bacterium that was isolated from seawater.
NCBI tax id
- NCBI tax id: 28258
- Matching level: species
strain history
| <- ICPB <- P. Baumann, A 140 |
| IAM 12928 <-- DSM 50416 <-- ICPB 3528 <-- P. Baumann A140. |
doi: 10.13145/bacdive6005.20221219.7.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Oceanospirillales
- family: Halomonadaceae
- genus: Cobetia
- species: Cobetia marina
- full scientific name: Cobetia marina (Cobet et al. 1970) Arahal et al. 2002
synonyms
@ref synonym 20215 Pseudomonas marina 20215 Halomonas marina 20215 Arthrobacter marinus 20215 Halomonas halodurans 20215 Deleya marina
@ref: 12717
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Oceanospirillales
family: Halomonadaceae
genus: Cobetia
species: Cobetia marina
full scientific name: Cobetia marina (Cobet et al. 1970) Arahal et al. 2002 emend. Romanenko et al. 2013
strain designation: A 140
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 12717 | MARINE AGAR (DSMZ Medium 123) | yes | https://mediadive.dsmz.de/medium/123 | Name: MARINE AGAR (DSMZ Medium 123) Composition: NaCl 24.0 g/l Agar 15.0 g/l MgCl2 x 6 H2O 11.0 g/l Bacto peptone 5.0 g/l Na2SO4 4.0 g/l CaCl2 x 6 H2O 2.0 g/l Yeast extract 1.0 g/l KCl 0.7 g/l KBr 0.1 g/l SrCl2 x 6 H2O 0.04 g/l H3BO3 0.03 g/l NaSiO3 x 9 H2O 0.005 g/l NaF 0.003 g/l NH4NO3 0.002 g/l Fe(III)PO4 x 4 H2O 0.001 g/l Distilled water |
| 33489 | Marine agar (MA) | yes | Distilled water make up to (1000.000 ml);Marine agar (55.100 g) |
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 12717 | positive | growth | 26 | mesophilic |
| 33489 | positive | growth | 25 | mesophilic |
| 46439 | positive | growth | 26 | mesophilic |
| 67770 | positive | growth | 25 | mesophilic |
Physiology and metabolism
observation
- @ref: 67770
- observation: quinones: Q-9
Isolation, sampling and environmental information
isolation
| @ref | sample type | geographic location | country | origin.country | continent |
|---|---|---|---|---|---|
| 12717 | seawater | ||||
| 46439 | Seawater,direct isolation with D-galactose | off coast of Hawaii | USA | USA | North America |
isolation source categories
- Cat1: #Environmental
- Cat2: #Aquatic
- Cat3: #Marine
Safety information
risk assessment
- @ref: 12717
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
GC content
| @ref | GC-content | method |
|---|---|---|
| 67770 | 63.3 | Buoyant density centrifugation (BD) |
| 67770 | 63 | thermal denaturation, midpoint method (Tm) |
External links
@ref: 12717
culture collection no.: DSM 50416, ATCC 27129, ICPB 3528, CCUG 16092, LMG 2218, CIP 74.10, JCM 20776, IAM 12928
straininfo link
| @ref | passport |
|---|---|
| 20218 | http://www.straininfo.net/strains/8857 |
| 20218 | http://www.straininfo.net/strains/8854 |
| 20218 | http://www.straininfo.net/strains/8858 |
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 12717 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 50416) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-50416 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 33489 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/10700 | ||||
| 46439 | Curators of the CCUG | Culture Collection University of Gothenburg (CCUG) (CCUG 16092) | https://www.ccug.se/strain?id=16092 | |||
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ |