Strain identifier
BacDive ID: 23314
Type strain:
Species: Streptomyces kaempferi
Strain Designation: I37
Strain history: <- KACC; KACC 15428
NCBI tax ID(s): 333725 (species)
General
@ref: 19249
BacDive-ID: 23314
DSM-Number: 42089
keywords: 16S sequence, Bacteria, mesophilic
description: Streptomyces kaempferi I37 is a mesophilic bacterium that was isolated from hay meadow soil.
NCBI tax id
- NCBI tax id: 333725
- Matching level: species
strain history: <- KACC; KACC 15428
doi: 10.13145/bacdive23314.20221219.7.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Streptomycetales
- family: Streptomycetaceae
- genus: Streptomyces
- species: Streptomyces kaempferi
- full scientific name: Streptomyces kaempferi Santhanam et al. 2013
@ref: 19249
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces kaempferi
full scientific name: Streptomyces kaempferi Santhanam et al. 2013
strain designation: I37
type strain: yes
Culture and growth conditions
culture medium
- @ref: 19249
- name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)
- growth: yes
- link: https://mediadive.dsmz.de/medium/65
- composition: Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
culture temp
- @ref: 19249
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 19249
- sample type: hay meadow soil
- geographic location: Nothumberland, Cockle Park Experimental Farm, Palace Leas hay meadow plot 6
- country: United Kingdom
- origin.country: GBR
- continent: Europe
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Engineered | #Agriculture | #Meadow |
#Environmental | #Terrestrial | #Soil |
#Host | #Plants | #Herbaceous plants (Grass,Crops) |
taxonmaps
- @ref: 69479
- File name: preview.99_3832.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15;96_102;97_109;98_2301;99_3832&stattab=map
- Last taxonomy: Streptomyces
- 16S sequence: HE591382
- Sequence Identity:
- Total samples: 2480
- soil counts: 1454
- aquatic counts: 120
- animal counts: 56
- plant counts: 850
Safety information
risk assessment
- @ref: 19249
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 19249
- description: Streptomyces kaempferi partial 16S rRNA gene, type strain I37T
- accession: HE591382
- length: 1462
- database: ena
- NCBI tax ID: 333725
GC content
- @ref: 19249
- GC-content: 73.0
- method: high performance liquid chromatography (HPLC)
External links
@ref: 19249
culture collection no.: DSM 42089, CGMCC 4.7020, KACC 15428
straininfo link
@ref | passport |
---|---|
20218 | http://www.straininfo.net/strains/886925 |
20218 | http://www.straininfo.net/strains/886926 |
literature
- topic: Phylogeny
- Pubmed-ID: 22865027
- title: Streptomyces erringtonii sp. nov. and Streptomyces kaempferi sp. nov., isolated from a hay meadow soil.
- authors: Santhanam R, Rong X, Huang Y, Goodfellow M
- journal: Antonie Van Leeuwenhoek
- DOI: 10.1007/s10482-012-9788-x
- year: 2012
- mesh: Bacterial Typing Techniques, Cluster Analysis, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Molecular Sequence Data, Nucleic Acid Hybridization, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Streptomyces/*classification/genetics/*isolation & purification/physiology
- topic2: Genetics
Reference
@id | authors | catalogue | doi/url | title | journal | pubmed |
---|---|---|---|---|---|---|
19249 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 42089) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-42089 | |||
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta |