Strain identifier
BacDive ID: 17675
Type strain:
Species: Acetivibrio ethanolgignens
Strain Designation: 77-6
Strain history: <- ATCC <- I.M. Robinson, 77-6
NCBI tax ID(s): 290052 (species)
General
@ref: 1269
BacDive-ID: 17675
DSM-Number: 3005
keywords: 16S sequence, Bacteria, anaerobe, mesophilic, animal pathogen
description: Acetivibrio ethanolgignens 77-6 is an anaerobe, mesophilic animal pathogen that was isolated from colon of pig with dysentery.
NCBI tax id
- NCBI tax id: 290052
- Matching level: species
strain history
- @ref: 1269
- history: <- ATCC <- I.M. Robinson, 77-6
doi: 10.13145/bacdive17675.20230509.8
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Clostridia
- order: Eubacteriales
- family: Oscillospiraceae
- genus: Acetivibrio
- species: Acetivibrio ethanolgignens
- full scientific name: Acetivibrio ethanolgignens Robinson and Ritchie 1981
synonyms
- @ref: 20215
- synonym: Acetanaerobacter ethanolgignens
@ref: 1269
domain: Bacteria
phylum: Firmicutes
class: Clostridia
order: Clostridiales
family: Oscillospiraceae
genus: Acetivibrio
species: Acetivibrio ethanolgignens
full scientific name: Acetivibrio ethanolgignens Robinson and Ritchie 1981
strain designation: 77-6
type strain: yes
Culture and growth conditions
culture medium
- @ref: 1269
- name: PYG MEDIUM WITH VOLATILE FATTY ACIDS (DSMZ Medium 328)
- growth: yes
- link: https://mediadive.dsmz.de/medium/328
- composition: Name: PYG MEDIUM WITH VOLATILE FATTY ACIDS (DSMZ Medium 328) Composition: Yeast extract 10.0 g/l Glucose 5.0 g/l Beef extract 5.0 g/l Trypticase 5.0 g/l L-Cysteine HCl x H2O 0.5 g/l (NH4)2SO4 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l KH2PO4 0.04 g/l K2HPO4 0.04 g/l MgSO4 x 7 H2O 0.0192 g/l CaCl2 x 2 H2O 0.012 g/l Haemin 0.005 g/l Vitamin K1 0.001 g/l Resazurin 0.001 g/l iso-Valeric acid DL-2-Methylbutyric acid n-Valeric acid n-Butyric acid Propionic acid Acetic acid iso-Butyric acid Distilled water
culture temp
- @ref: 1269
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 1269
- oxygen tolerance: anaerobe
Isolation, sampling and environmental information
isolation
- @ref: 1269
- sample type: colon of pig with dysentery
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Infection | #Disease | |
#Host | #Mammals | #Suidae (Pig,Swine) |
#Host Body-Site | #Gastrointestinal tract | #Large intestine |
Safety information
risk assessment
- @ref: 1269
- pathogenicity animal: yes
- biosafety level: 2
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 1269
- description: Acetivibrio ethanolgignens partial 16S rRNA gene, type strain DSM 3005T
- accession: FR749897
- length: 1529
- database: ena
- NCBI tax ID: 290052
GC content
- @ref: 1269
- GC-content: 40.0
External links
@ref: 1269
culture collection no.: DSM 3005, ATCC 33324
straininfo link
@ref | passport |
---|---|
20218 | http://www.straininfo.net/strains/3 |
20218 | http://www.straininfo.net/strains/2 |
literature
- topic: Phylogeny
- Pubmed-ID: 33892267
- title: Butyribacter intestini gen. nov., sp. nov., a butyric acid-producing bacterium of the family Lachnospiraceae isolated from human faeces, and reclassification of Acetivibrio ethanolgignens as Acetanaerobacter ethanolgignens gen. nov., comb. nov.
- authors: Zou Y, Xue W, Lin X, Lv M, Luo G, Dai Y, Sun H, Liu SW, Sun CH, Hu T, Xiao L
- journal: Syst Appl Microbiol
- DOI: 10.1016/j.syapm.2021.126201
- year: 2021
- mesh: Bacterial Typing Techniques, Base Composition, Butyric Acid/*metabolism, Clostridiales/*classification, DNA, Bacterial/genetics, Fatty Acids/chemistry, Feces/microbiology, Firmicutes/*classification/isolation & purification, Humans, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA
- topic2: Pathogenicity
Reference
@id | authors | catalogue | doi/url | title | journal | pubmed |
---|---|---|---|---|---|---|
1269 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 3005) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-3005 | |||
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg | 10.1093/nar/gkaa1025 | BRENDA, the ELIXIR core data resource in 2021: new developments and updates | Nucleic Acids Res. 49: D498-D508 2020 | 33211880 |