Strain identifier
version 8.1 (current version)
General
@ref: 20215
BacDive-ID: 167747
DSM-Number: 103159
keywords: 16S sequence, Bacteria
description: Olsenella phocaeensis CSURP2936 is a bacterium of the family Atopobiaceae.
NCBI tax id
- NCBI tax id: 1852385
- Matching level: species
doi: 10.13145/bacdive167747.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Coriobacteriia
- order: Coriobacteriales
- family: Atopobiaceae
- genus: Olsenella
- species: Olsenella phocaeensis
- full scientific name: Olsenella phocaeensis Zgheib et al. 2021
synonyms
- @ref: 20215
- synonym: Olsenella phocaeensis
@ref: 20215
domain: Bacteria
phylum: Actinomycetota
class: Coriobacteriia
order: Coriobacteriales
family: Atopobiaceae
genus: Olsenella
species: Olsenella phocaeensis
full scientific name: Olsenella phocaeensis Zgheib et al. 2021
type strain: yes
Isolation, sampling and environmental information
taxonmaps
- @ref: 69479
- File name: preview.99_2561.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_150;96_1373;97_1633;98_1984;99_2561&stattab=map
- Last taxonomy: Olsenella phocaeensis
- 16S sequence: LT576409
- Sequence Identity:
- Total samples: 4122
- soil counts: 170
- aquatic counts: 47
- animal counts: 3787
- plant counts: 118
Sequence information
16S sequences
- @ref: 20215
- description: Olsenella sp. Marseille-P2936 partial 16S rRNA gene, strain Marseille-P2936
- accession: LT576409
- length: 1478
- database: ena
- NCBI tax ID: 1852385
External links
@ref: 20215
culture collection no.: CSURP2936, Marseille- P2936, DSM 103159
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Phylogeny | 34047688 | New human-associated species of the family Atopobiaceae and proposal to reclassify members of the genus Olsenella. | Zgheib R, Anani H, Meng MM, Mailhe M, Ricaboni D, Morand A, Caputo A, Traore SI, Fontanini A, Armstrong N, Raoult D, Fournier PE | Int J Syst Evol Microbiol | 10.1099/ijsem.0.004819 | 2021 | Actinobacteria/*classification, Bacterial Typing Techniques, DNA, Bacterial/genetics, Genomics, Humans, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA | Genetics |
| Phylogeny | 36288087 | Granulimonas faecalis gen. nov., sp. nov., and Leptogranulimonas caecicola gen. nov., sp. nov., novel lactate-producing Atopobiaceae bacteria isolated from mouse intestines, and an emended description of the family Atopobiaceae. | Morinaga K, Kusada H, Sakamoto S, Murakami T, Toyoda A, Mori H, Meng XY, Takashino M, Murotomi K, Tamaki H | Int J Syst Evol Microbiol | 10.1099/ijsem.0.005596 | 2022 | Animals, Mice, RNA, Ribosomal, 16S/genetics, Phylogeny, Base Composition, DNA, Bacterial/genetics, Bacterial Typing Techniques, *Lactic Acid, *Peptones, Sequence Analysis, DNA, Fatty Acids/chemistry, Hydrogen, Formates, Butyrates, Glucose, Intestines | Transcriptome |
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |