Strain identifier
BacDive ID: 162394
Type strain:
Species: Vibrio sp.
Strain history: T. Kudo W'3 <-- T. Inoue.
NCBI tax ID(s): 1481931 (species)
version 7.1
General
@ref: 67770
BacDive-ID: 162394
keywords: genome sequence, Bacteria, mesophilic
description: Vibrio sp. JCM 19061 is a mesophilic bacterium of the family Vibrionaceae.
NCBI tax id
- NCBI tax id: 1481931
- Matching level: species
strain history: T. Kudo W'3 <-- T. Inoue.
doi: 10.13145/bacdive162394.20221219.7.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Vibrionales
- family: Vibrionaceae
- genus: Vibrio
- species: Vibrio sp.
- full scientific name: Vibrio Pacini 1854 (Approved Lists 1980)
synonyms
@ref synonym 20215 Beneckea 20215 Allomonas 20215 Lucibacterium
@ref: 67770
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Vibrionales
family: Vibrionaceae
genus: Vibrio
species: Vibrio sp.
full scientific name: Vibrio sp.
type strain: no
Morphology
cell morphology
@ref | motility | confidence | gram stain |
---|---|---|---|
69480 | yes | 88.101 | |
69480 | 99.198 | negative |
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Physiology and metabolism
spore formation
- @ref: 69480
- spore formation: no
- confidence: 99.3
halophily
- @ref: 69480
- halophily level: non-halophilic
- confidence: 88.877
Sequence information
Genome sequences
@ref | description | accession | assembly level | database | NCBI tax ID |
---|---|---|---|---|---|
66792 | Vibrio sp. JCM 19061 JCM 19061 | GCA_001310695 | contig | ncbi | 1481931 |
66792 | Vibrio sp. JCM 19061 | 1481931.3 | wgs | patric | 1481931 |
66792 | Vibrio sp. JCM 19061 | 2728369654 | draft | img | 1481931 |
External links
@ref: 67770
culture collection no.: JCM 19061
Reference
@id | authors | title | doi/url |
---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes |
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes |