General

@ref: 67770

BacDive-ID: 162105

keywords: 16S sequence, Bacteria, mesophilic

description: Oceaniovalibus guishaninsula JCM 17765 is a mesophilic bacterium that was isolated from Surface seawater off the coast of Guishan island.

NCBI tax id

• NCBI tax id: 1046117
• Matching level: species

strain history: Y. Fu JLT2003 <-- K. Liu.

doi: 10.13145/bacdive162105.20221219.7.1

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/pseudomonadota
• domain: Bacteria
• phylum: Pseudomonadota
• class: Alphaproteobacteria
• order: Rhodobacterales
• family: Rhodobacteraceae
• genus: Oceaniovalibus
• species: Oceaniovalibus guishaninsula
• full scientific name: Oceaniovalibus guishaninsula Liu et al. 2012

@ref: 67770

domain: Bacteria

phylum: Proteobacteria

class: Alphaproteobacteria

order: Rhodobacterales

family: Rhodobacteraceae

genus: Oceaniovalibus

species: Oceaniovalibus guishaninsula

full scientific name: Oceaniovalibus guishaninsula Liu et al.

type strain: yes

Culture and growth conditions

culture temp

• @ref: 67770
• growth: positive
• type: growth
• temperature: 30
• range: mesophilic

Physiology and metabolism

observation

• @ref: 67770
• observation: quinones: Q-10

Isolation, sampling and environmental information

isolation

• @ref: 67770
• sample type: Surface seawater off the coast of Guishan island
• country: Taiwan
• origin.country: TWN
• continent: Asia

taxonmaps

• @ref: 69479
• File name: preview.99_6664.png
• url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_19;96_3160;97_3870;98_4915;99_6664&stattab=map
• Last taxonomy: Oceaniovalibus guishaninsula subclade
• 16S sequence: HQ638975
• Sequence Identity:
• Total samples: 1462
• soil counts: 168
• aquatic counts: 1185
• animal counts: 94
• plant counts: 15

Sequence information

16S sequences

• @ref: 67770
• description: Oceaniovalibus guishaninsula strain JLT2003 16S ribosomal RNA gene, partial sequence
• accession: HQ638975
• length: 1390
• database: ena
• NCBI tax ID: 1231392

GC content

• @ref: 67770
• GC-content: 62.3
• method: thermal denaturation, midpoint method (Tm)

External links

@ref: 67770

culture collection no.: JCM 17765, CGMCC 1.10827

literature

• topic: Phylogeny
• Pubmed-ID: 22278760
• title: Oceaniovalibus guishaninsula gen. nov., sp. nov., a marine bacterium of the family Rhodobacteraceae.
• authors: Liu K, Zong R, Li Q, Fu Y, Xu Y, Wang Y, Jiao N
• journal: Curr Microbiol
• DOI: 10.1007/s00284-012-0081-z
• year: 2012
• mesh: Bacterial Typing Techniques, Base Composition, Cluster Analysis, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Fatty Acids/analysis, Locomotion, Molecular Sequence Data, Phospholipids/analysis, Phylogeny, Pigments, Biological/metabolism, RNA, Ribosomal, 16S/genetics, Rhodobacteraceae/*classification/genetics/*isolation & purification/physiology, Seawater/*microbiology, Sequence Analysis, DNA, Taiwan, Ubiquinone/analysis
• topic2: Genetics

Reference