Strain identifier
BacDive ID: 161625
Type strain: 
Species: Secundilactobacillus paracollinoides
Strain history: K. Suzuki LA3.
NCBI tax ID(s): 240427 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 161625
keywords: 16S sequence, Bacteria, mesophilic
description: Secundilactobacillus paracollinoides JCM 15728 is a mesophilic bacterium that was isolated from Brewery environment.
NCBI tax id
- NCBI tax id: 240427
- Matching level: species
strain history
- @ref: 67770
- history: K. Suzuki LA3.
doi: 10.13145/bacdive161625.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Lactobacillales
- family: Lactobacillaceae
- genus: Secundilactobacillus
- species: Secundilactobacillus paracollinoides
- full scientific name: Secundilactobacillus paracollinoides (Suzuki et al. 2004) Zheng et al. 2020
synonyms
- @ref: 20215
- synonym: Lactobacillus paracollinoides
@ref: 67770
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Lactobacillales
family: Lactobacillaceae
genus: Secundilactobacillus
species: Secundilactobacillus paracollinoides
full scientific name: Secundilactobacillus paracollinoides (Suzuki et al. 2004) Zheng et al. 2020
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 25
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Brewery environment
taxonmaps
- @ref: 69479
- File name: preview.99_1291.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_45;96_750;97_873;98_1020;99_1291&stattab=map
- Last taxonomy: Secundilactobacillus
- 16S sequence: LC311085
- Sequence Identity:
- Total samples: 11203
- soil counts: 286
- aquatic counts: 466
- animal counts: 10122
- plant counts: 329
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 67770 | Lactobacillus paracollinoides gene for 16S ribosomal RNA, partial sequence, strain: JCM 15728 | AB473625 | 1511 | ena | 240427 |
| 67770 | Lactobacillus paracollinoides gene for 16S ribosomal RNA, partial sequence, strain: JCM 15728 | LC311085 | 1515 | ena | 240427 |
External links
@ref: 67770
culture collection no.: JCM 15728
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |