Strain identifier
BacDive ID: 161373
Type strain: 
Species: Zobellella denitrificans
Strain history: Q. Lai F13-1.
NCBI tax ID(s): 347534 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 161373
keywords: genome sequence, 16S sequence, Bacteria, mesophilic
description: Zobellella denitrificans JCM 13529 is a mesophilic bacterium that was isolated from Marine sediment from an oil-dock in Houlong.
NCBI tax id
- NCBI tax id: 347534
- Matching level: species
strain history
- @ref: 67770
- history: Q. Lai F13-1.
doi: 10.13145/bacdive161373.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Aeromonadales
- family: Aeromonadaceae
- genus: Zobellella
- species: Zobellella denitrificans
- full scientific name: Zobellella denitrificans Lin and Shieh 2006
@ref: 67770
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Aeromonadales
family: Aeromonadaceae
genus: Zobellella
species: Zobellella denitrificans
full scientific name: Zobellella denitrificans Lin and Shieh 2006
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 25
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Marine sediment from an oil-dock in Houlong
- geographic location: Quanzhou, Fujian
- country: China
- origin.country: CHN
- continent: Asia
taxonmaps
- @ref: 69479
- File name: preview.99_26649.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_11;96_2774;97_16131;98_19985;99_26649&stattab=map
- Last taxonomy: Zobellella denitrificans subclade
- 16S sequence: DQ097665
- Sequence Identity:
- Total samples: 143
- soil counts: 20
- aquatic counts: 69
- animal counts: 50
- plant counts: 4
Sequence information
16S sequences
- @ref: 67770
- description: Oceanimonas denitrificans strain F13-1 16S ribosomal RNA gene, partial sequence
- accession: DQ097665
- length: 1505
- database: ena
- NCBI tax ID: 335839
Genome sequences
- @ref: 67770
- description: Zobellella denitrificans F13-1
- accession: GCA_002407485
- assembly level: complete
- database: ncbi
- NCBI tax ID: 347534
External links
@ref: 67770
culture collection no.: JCM 13529
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |