Strain identifier
version 7.1
General
@ref: 45496
BacDive-ID: 142238
keywords: genome sequence, Bacteria
description: Escherichia coli CCUG 11378 is a bacterium of the family Enterobacteriaceae.
NCBI tax id
- NCBI tax id: 562
- Matching level: species
doi: 10.13145/bacdive142238.20221219.7.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Enterobacterales
- family: Enterobacteriaceae
- genus: Escherichia
- species: Escherichia coli
- full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Bacillus coli
@ref: 45496
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Enterobacterales
family: Enterobacteriaceae
genus: Escherichia
species: Escherichia coli
type strain: no
Morphology
cell morphology
| @ref | motility | confidence | gram stain |
|---|---|---|---|
| 69480 | yes | 65.924 | |
| 69480 | 99.014 | negative |
Physiology and metabolism
spore formation
- @ref: 69480
- spore formation: no
- confidence: 94.335
halophily
- @ref: 69480
- halophily level: non-halophilic
- confidence: 94.005
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Escherichia coli NCTC9076 | GCA_900449265 | contig | ncbi | 562 |
| 66792 | Escherichia coli strain NCTC9076 | 562.34240 | wgs | patric | 562 |
| 66792 | Sphingomonas sp. ABOLH S-NIH.Pt17_1112 | GCA_003951715 | contig | patric | 1985881 |
External links
@ref: 45496
culture collection no.: CCUG 11378, ATCC 23536, NCTC 9076
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 45496 | Curators of the CCUG | https://www.ccug.se/strain?id=11378 | Culture Collection University of Gothenburg (CCUG) (CCUG 11378) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes |